RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 BBXQ8WY36 941 aaPredicted RBP16.36■□□□□ 0.21
TTC39A-208ENST00000413473 EIF2AK1Q9BQI3 630 aaKnown RBP16.36■□□□□ 0.21
TTC39A-208ENST00000413473 IKZF4Q9H2S9 585 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 GCNT4Q9P109 453 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
TTC39A-208ENST00000413473 ZNF76P36508 570 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 MCTP2Q6DN12 878 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 SLC30A10Q6XR72 485 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 PROCA1Q8NCQ7 364 aaPredicted RBP16.36■□□□□ 0.21
TTC39A-208ENST00000413473 TPCN2Q8NHX9 752 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 AP1M1Q9BXS5 423 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
TTC39A-208ENST00000413473 QSER1Q2KHR3 1735 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 TMCO5BA8MYB1 307 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
TTC39A-208ENST00000413473 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 TATDN1Q6P1N9 297 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 METTL13Q8N6R0 699 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 PIGOQ8TEQ8 1089 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 TAF1DQ9H5J8 278 aaPredicted RBP16.35■□□□□ 0.21
TTC39A-208ENST00000413473 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 OPLAHO14841 1288 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 TGFB1I1O43294 461 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 EYA4O95677 639 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 H2AFZP0C0S5 128 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 CIITAP33076 1130 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 JAM2P57087 298 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 RINT1Q6NUQ1 792 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 TMEM179Q6ZVK1 233 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 H2AFVQ71UI9 128 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 ACTRT1Q8TDG2 376 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 POLR3CQ9BUI4 534 aaPredicted RBP16.35■□□□□ 0.21
TTC39A-208ENST00000413473 ISCUQ9H1K1 167 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 FBXL5Q9UKA1 691 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 STK24Q9Y6E0 443 aa16.35■□□□□ 0.21
TTC39A-208ENST00000413473 SLC16A3O15427 465 aaKnown RBP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 CTTNQ14247 550 aaKnown RBP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 ABCB5Q2M3G0 1257 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 PEX26Q7Z412 305 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 CD302Q8IX05 232 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 DDX3XO00571 662 aaKnown RBP eCLIP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 SART1O43290 800 aaKnown RBP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 GFPT2O94808 682 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 CLSTN1O94985 981 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 NMT1P30419 496 aaKnown RBP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 MMP14P50281 582 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
TTC39A-208ENST00000413473 NENFQ9UMX5 172 aa16.34■□□□□ 0.21
TTC39A-208ENST00000413473 A6NNZ2 444 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 ZEB2O60315 1214 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 ZBTB48P10074 688 aaPredicted RBP16.33■□□□□ 0.21
TTC39A-208ENST00000413473 NPR1P16066 1061 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 HSPA9P38646 679 aaKnown RBP16.33■□□□□ 0.21
TTC39A-208ENST00000413473 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.21
TTC39A-208ENST00000413473 TUBB8Q3ZCM7 444 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 TPH2Q8IWU9 490 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 MYCT1Q8N699 235 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 RNPC3Q96LT9 517 aaKnown RBP16.33■□□□□ 0.21
TTC39A-208ENST00000413473 IDI2Q9BXS1 227 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 DDX47Q9H0S4 455 aaKnown RBP16.33■□□□□ 0.21
TTC39A-208ENST00000413473 SAMM50Q9Y512 469 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 FAM169AQ9Y6X4 670 aa16.33■□□□□ 0.21
TTC39A-208ENST00000413473 UBAP1LF5GYI3 381 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 PGRMC1O00264 195 aaKnown RBP16.33■□□□□ 0.2
TTC39A-208ENST00000413473 ZBTB39O15060 712 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 BMP3P12645 472 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 JAG1P78504 1218 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 ZC2HC1CQ53FD0 456 aaPredicted RBP16.33■□□□□ 0.2
TTC39A-208ENST00000413473 KDM7AQ6ZMT4 941 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 MAATS1Q7Z4T9 603 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 EFCAB13Q8IY85 973 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 GMCL1P1Q8NEA9 526 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 PPM1EQ8WY54 764 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 BORCS6Q96GS4 357 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 GMCL1Q96IK5 515 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.33■□□□□ 0.2
TTC39A-208ENST00000413473 OLFML3Q9NRN5 406 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 PLAAQ9Y263 795 aa16.33■□□□□ 0.2
TTC39A-208ENST00000413473 NOC2LQ9Y3T9 749 aaKnown RBP16.33■□□□□ 0.2
TTC39A-208ENST00000413473 VGLL3A8MV65 326 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 ANXA13P27216 316 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 ECHS1P30084 290 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 CEP85LQ5SZL2 805 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 SLFN11Q7Z7L1 901 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 PACS2Q86VP3 889 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 SPICE1Q8N0Z3 855 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
TTC39A-208ENST00000413473 SIPA1L1O43166 1804 aa16.32■□□□□ 0.2
TTC39A-208ENST00000413473 KRIT1O00522 736 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms