RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 DHX9Q08211 1270 aaKnown RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 BYSLQ13895 437 aaKnown RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 KRT71Q3SY84 523 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 WLSQ5T9L3 541 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 EPM2AIP1Q7L775 607 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 MAGOHBQ96A72 148 aaKnown RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 SGSM3Q96HU1 749 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 SIX2Q9NPC8 291 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 PPP1R11O60927 126 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 IFFO1Q0D2I5 559 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 GRAPQ13588 217 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 NEDD9Q14511 834 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 HOOK3Q86VS8 718 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 ADGRF4Q8IZF3 695 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 GRAPLQ8TC17 118 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 KDM4CQ9H3R0 1056 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 CD248Q9HCU0 757 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 GPCPD1Q9NPB8 672 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 AMFRQ9UKV5 643 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 NCANO14594 1321 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 CYP3A7-CYP3A51PA0A087WV96 503 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 DNM1LO00429 736 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 C21orf2O43822 256 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 DRD4P21917 467 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 CYP3A7P24462 503 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 CACNB1Q02641 598 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-202ENST00000413219 CLUL1Q15846 466 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 SNCBQ16143 134 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 RC3H1Q5TC82 1133 aaKnown RBP19.19■□□□□ 0.66
SDCBP-202ENST00000413219 CYB5D1Q6P9G0 228 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 DAAM2Q86T65 1068 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 PARP9Q8IXQ6 854 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 FUKQ8N0W3 1084 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 MBOAT7Q96N66 472 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 MYH7BA7E2Y1 1941 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 GAKO14976 1311 aa19.19■□□□□ 0.66
SDCBP-202ENST00000413219 DDX3XO00571 662 aaKnown RBP eCLIP19.18■□□□□ 0.664e-16■□□□□ 11.2
SDCBP-202ENST00000413219 PTENP60484 403 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 XRCC4Q13426 336 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 BMT2Q1RMZ1 405 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 MOXD1Q6UVY6 613 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 SLFN12Q8IYM2 578 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 LRRC47Q8N1G4 583 aaKnown RBP19.18■□□□□ 0.66
SDCBP-202ENST00000413219 GJA10Q969M2 543 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 NAP1L3Q99457 506 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-202ENST00000413219 FMO2Q99518 471 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 PSTPIP2Q9H939 334 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 DNAJC8O75937 253 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-202ENST00000413219 NUDT17P0C025 328 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 RPL13P26373 211 aaKnown RBP19.18■□□□□ 0.66
SDCBP-202ENST00000413219 SCTRP47872 440 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 GIT2Q14161 759 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 GPATCH4Q5T3I0 446 aaKnown RBP19.18■□□□□ 0.66
SDCBP-202ENST00000413219 ERMARDQ5T6L9 678 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 CPLX4Q7Z7G2 160 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 CCT6BQ92526 530 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 XPO6Q96QU8 1125 aaKnown RBP19.18■□□□□ 0.66
SDCBP-202ENST00000413219 MCM8Q9UJA3 840 aa19.18■□□□□ 0.66
SDCBP-202ENST00000413219 ZBTB5O15062 677 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 MED24O75448 989 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 RPS6KA4O75676 772 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 CASP5P51878 434 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 GABPAQ06546 454 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 SLC30A5Q8TAD4 765 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 ATP8B4Q8TF62 1192 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 CHMP6Q96FZ7 201 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 FAM129AQ9BZQ8 928 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 TYW1Q9NV66 732 aaKnown RBP19.17■□□□□ 0.66
SDCBP-202ENST00000413219 STK24Q9Y6E0 443 aa19.17■□□□□ 0.66
SDCBP-202ENST00000413219 FAM187AA6NFU0 413 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 KCNQ2O43526 872 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 TTLL1O95922 423 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 HOXD13P35453 343 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 STAT1P42224 750 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 SYT2Q8N9I0 419 aaPredicted RBP19.16■□□□□ 0.66
SDCBP-202ENST00000413219 U2AF1L4Q8WU68 220 aaKnown RBP19.16■□□□□ 0.66
SDCBP-202ENST00000413219 RFFLQ8WZ73 363 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 CARD9Q9H257 536 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 ZHX3Q9H4I2 956 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 CD209Q9NNX6 404 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 SRP68Q9UHB9 627 aaKnown RBP19.16■□□□□ 0.66
SDCBP-202ENST00000413219 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 DCDC2CA8MYV0 355 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 AKAP3O75969 853 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 TMEM253P0C7T8 217 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 IL1R1P14778 569 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 LMNB1P20700 586 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 GALCP54803 685 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 DUPD1Q68J44 220 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 CROCCP2Q86T23 111 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 PROCA1Q8NCQ7 364 aaPredicted RBP19.16■□□□□ 0.66
SDCBP-202ENST00000413219 ERMNQ8TAM6 284 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 SLC35C1Q96A29 364 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 PGM2Q96G03 612 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 CELF4Q9BZC1 486 aaKnown RBP19.16■□□□□ 0.66
SDCBP-202ENST00000413219 DPH5Q9H2P9 285 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 GCNT4Q9P109 453 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 MYO3BQ8WXR4 1341 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 NRAPQ86VF7 1730 aa19.16■□□□□ 0.66
SDCBP-202ENST00000413219 DDX3YO15523 660 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms