RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 HGSNATQ68CP4 663 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 CEP112Q8N8E3 955 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 SYN2Q92777 582 aaPredicted RBP26.97■■□□□ 1.91
VRK2-202ENST00000412104 KLRG1Q96E93 195 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 PURBQ96QR8 312 aaKnown RBP26.97■■□□□ 1.91
VRK2-202ENST00000412104 IFIH1Q9BYX4 1025 aaKnown RBP26.97■■□□□ 1.91
VRK2-202ENST00000412104 TSGA10Q9BZW7 698 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 GANQ9H2C0 597 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 SAMM50Q9Y512 469 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 AKR1B10O60218 316 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 MAPK7Q13164 816 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 MAPK8IP2Q13387 824 aaPredicted RBP26.96■■□□□ 1.91
VRK2-202ENST00000412104 NFIL3Q16649 462 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 SFMBT2Q5VUG0 894 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 ARHGEF16Q5VV41 709 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 PADI6Q6TGC4 694 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 STXBP4Q6ZWJ1 553 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 IKZF4Q9H2S9 585 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 PCDHA13Q9Y5I0 950 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 SSU72P8A0A1W2PR75 194 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 C19orf81C9J6K1 198 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 DSG3P32926 999 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 CHMP4BP1P59074 171 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 KIF5AQ12840 1032 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 BAATQ14032 418 aaPredicted RBP26.96■■□□□ 1.91
VRK2-202ENST00000412104 DCAF17Q5H9S7 520 aaPredicted RBP26.96■■□□□ 1.91
VRK2-202ENST00000412104 KSR1Q8IVT5 923 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 GPC2Q8N158 579 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 PPP2R3BQ9Y5P8 575 aa26.96■■□□□ 1.91
VRK2-202ENST00000412104 TLR2O60603 784 aa26.95■■□□□ 1.9
VRK2-202ENST00000412104 ASTE1Q2TB18 679 aaPredicted RBP26.95■■□□□ 1.9
VRK2-202ENST00000412104 SNRNP48Q6IEG0 339 aaKnown RBP26.95■■□□□ 1.9
VRK2-202ENST00000412104 DAW1Q8N136 415 aa26.95■■□□□ 1.9
VRK2-202ENST00000412104 DBR1Q9UK59 544 aaKnown RBP26.95■■□□□ 1.9
VRK2-202ENST00000412104 ADAMTS5Q9UNA0 930 aa26.95■■□□□ 1.9
VRK2-202ENST00000412104 DUSP10Q9Y6W6 482 aa26.95■■□□□ 1.9
VRK2-202ENST00000412104 QARSP47897 775 aaKnown RBP26.94■■□□□ 1.9
VRK2-202ENST00000412104 HIRAP54198 1017 aaPredicted RBP26.94■■□□□ 1.9
VRK2-202ENST00000412104 OAZ1P54368 228 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 WHAMMP3Q1A5X7 153 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 PUF60Q9UHX1 559 aaKnown RBP26.94■■□□□ 1.9
VRK2-202ENST00000412104 MYO6Q9UM54 1294 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 TFRCP02786 760 aaKnown RBP26.94■■□□□ 1.9
VRK2-202ENST00000412104 CLCN6P51797 869 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 SLC9C1Q4G0N8 1177 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 TDRD12Q587J7 1177 aaKnown RBP26.94■■□□□ 1.9
VRK2-202ENST00000412104 GPR161Q8N6U8 529 aaKnown RBP26.94■■□□□ 1.9
VRK2-202ENST00000412104 RABGGTAQ92696 567 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 SLC35C1Q96A29 364 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 EPC1Q9H2F5 836 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 ZNF214Q9UL59 606 aaPredicted RBP26.94■■□□□ 1.9
VRK2-202ENST00000412104 PCDHB13Q9Y5F0 798 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 WDR90Q96KV7 1748 aa26.94■■□□□ 1.9
VRK2-202ENST00000412104 TESPA1A2RU30 521 aaPredicted RBP26.93■■□□□ 1.9
VRK2-202ENST00000412104 USO1O60763 962 aaKnown RBP26.93■■□□□ 1.9
VRK2-202ENST00000412104 ATP9AO75110 1047 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 LYPLA2O95372 231 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 SERPING1P05155 500 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 RARRES1P49788 294 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 COG2Q14746 738 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 NOL9Q5SY16 702 aaKnown RBP26.93■■□□□ 1.9
VRK2-202ENST00000412104 TCERG1LQ5VWI1 586 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 DPY19L2P1Q6NXN4 242 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 TRAPPC11Q7Z392 1133 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 PLCB1Q9NQ66 1216 aa26.93■■□□□ 1.9
VRK2-202ENST00000412104 MACROD2A1Z1Q3 448 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 ENC1O14682 589 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 SECISBP2LQ93073 1101 aaKnown RBP26.92■■□□□ 1.9
VRK2-202ENST00000412104 BORCS6Q96GS4 357 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 STRA6Q9BX79 667 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 PPP1R37O75864 691 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 ATP1A1P05023 1023 aaKnown RBP26.92■■□□□ 1.9
VRK2-202ENST00000412104 ACTN1P12814 892 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 SLC9A1P19634 815 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 GFPT1Q06210 699 aaPredicted RBP26.92■■□□□ 1.9
VRK2-202ENST00000412104 RAPGEF1Q13905 1077 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 XRRA1Q6P2D8 792 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 HS2ST1Q7LGA3 356 aa26.92■■□□□ 1.9
VRK2-202ENST00000412104 ARGLU1Q9NWB6 273 aaPredicted RBP26.92■■□□□ 1.9
VRK2-202ENST00000412104 LMNB1P20700 586 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 CCND2P30279 289 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 PSMC2P35998 433 aaKnown RBP26.91■■□□□ 1.9
VRK2-202ENST00000412104 TMEM132BQ14DG7 1078 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 UGCGQ16739 394 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 EXOC3L4Q17RC7 722 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 CATSPERGQ6ZRH7 1159 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 FAM186BQ8IYM0 893 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 GBP3Q9H0R5 595 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 AGPAT3Q9NRZ7 376 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 ZNF446Q9NWS9 450 aa26.91■■□□□ 1.9
VRK2-202ENST00000412104 CCNE2O96020 404 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 PON1P27169 355 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 YWHABP31946 246 aaKnown RBP26.9■■□□□ 1.9
VRK2-202ENST00000412104 JAK3P52333 1124 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 MAEAQ7L5Y9 396 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 MKNK1Q9BUB5 465 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 AIPL1Q9NZN9 384 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 TMOD4Q9NZQ9 345 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 HDAC6Q9UBN7 1215 aa26.9■■□□□ 1.9
VRK2-202ENST00000412104 DDX41Q9UJV9 622 aaKnown RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms