RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PLCG2P16885 1265 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CA4P22748 312 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PTPREP23469 700 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 NCALDP61601 193 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 RPS8P62241 208 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 EEF1A2Q05639 463 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CSTF3Q12996 717 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 MAPRE2Q15555 327 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 KIZQ2M2Z5 673 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 MEI1Q5TIA1 1274 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PRUNE1Q86TP1 453 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 DDX17Q92841 729 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 RNPEPQ9H4A4 650 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 METTL8Q9H825 291 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SCN3BQ9NY72 215 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SLC12A6Q9UHW9 1150 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF233A6NK53 670 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PDZK1P1A8MUH7 402 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ATP12AP54707 1039 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PDE4BQ07343 736 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 STRN3Q13033 797 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 STX5Q13190 355 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 RASGRF1Q13972 1273 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 EMC2Q15006 297 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 GRAMD1BQ3KR37 738 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SV2CQ496J9 727 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 RARS2Q5T160 578 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 TTC23LQ6PF05 361 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 MYLK4Q86YV6 388 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC197Q8NCU1 140 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 RAPGEF5Q92565 580 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ZCWPW1Q9H0M4 648 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SNX25Q9H3E2 840 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 TSHZ2Q9NRE2 1034 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 STOX2Q9P2F5 926 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 LIMA1Q9UHB6 759 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 FAM32AQ9Y421 112 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 TTLL3Q9Y4R7 772 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 MYBBP1AQ9BQG0 1328 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CFAP69A5D8W1 941 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 GSTM5P46439 218 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 MECOMQ03112 1051 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 BICRALQ6AI39 1079 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PPP1R2P3Q6NXS1 205 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ALKBH5Q6P6C2 394 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 FRA10AC1Q70Z53 315 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ANO3Q9BYT9 981 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 GPHNQ9NQX3 736 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PNO1Q9NRX1 252 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ARHGAP28Q9P2N2 729 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PCDHGB4Q9UN71 923 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SRPRBQ9Y5M8 271 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ARHGEF37A1IGU5 675 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CFLARO15519 480 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF189O75820 626 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PLEKHA8P1O95397 391 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 P4HBP07237 508 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 LCP1P13796 627 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 KRT9P35527 623 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 STARP49675 285 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CDC16Q13042 620 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ADCK5Q3MIX3 580 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 TRIM67Q6ZTA4 783 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SCN4BQ8IWT1 228 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SAMD3Q8N6K7 520 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 NCOA7Q8NI08 942 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 POC1BQ8TC44 478 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 DCAF11Q8TEB1 546 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SH3TC2Q8TF17 1288 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 S100A13Q99584 98 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 USP26Q9BXU7 913 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SEMA6CQ9H3T2 930 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 RAB20Q9NX57 234 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 PACSIN3Q9UKS6 424 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 FHOD1Q9Y613 1164 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 C5orf58C9J3I9 102 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 DDAH1O94760 285 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 IL10P22301 178 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 HMOX2P30519 316 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SARSP49591 514 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 GNAQP50148 359 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 GSTO1P78417 241 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 EXOSC10Q01780 885 aaKnown RBP4.89□□□□□ -1.63
PTPN13-202ENST00000411767 RALGDSQ12967 914 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CRYMQ14894 314 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC80Q76M96 950 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF227Q86WZ6 799 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 KCTD17Q8N5Z5 321 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 TEX19Q8NA77 164 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 KBTBD3Q8NAB2 608 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 MAML1Q92585 1016 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CYFIP2Q96F07 1278 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 SLC4A9Q96Q91 983 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 BBS2Q9BXC9 721 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 CARD8Q9Y2G2 431 aa4.89□□□□□ -1.63
PTPN13-202ENST00000411767 H3BMM5 538 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ATP6V1C1P21283 382 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TRAPPC10P48553 1259 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ADKP55263 362 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MDM2Q00987 491 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms