RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CCM2LQ9NUG4 571 aaPredicted RBP5.99□□□□□ -1.45
LSM5-205ENST00000409952 GFOD1Q9NXC2 390 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 FNIP2Q9P278 1114 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 EBF1Q9UH73 591 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 NOC2LQ9Y3T9 749 aaKnown RBP5.99□□□□□ -1.45
LSM5-205ENST00000409952 H7C1D1 291 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 CCER2I3L3R5 266 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 MSCO60682 206 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 MYBP10242 640 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 PTMSP20962 102 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 ADKP55263 362 aaKnown RBP5.98□□□□□ -1.45
LSM5-205ENST00000409952 ST5P78524 1137 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 POU4F1Q01851 419 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 BTKQ06187 659 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 KCNAB2Q13303 367 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 TRIM14Q14142 442 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 JAKMIP3Q5VZ66 844 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 LILRA6Q6PI73 481 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 LVRNQ6Q4G3 990 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 CCDC149Q6ZUS6 474 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 OVCH2Q7RTZ1 564 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 CMIPQ8IY22 773 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 MIER2Q8N344 545 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 SPATA5Q8NB90 893 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 FAM156AQ8NDB6 213 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 PDZD8Q8NEN9 1154 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 DEPTORQ8TB45 409 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 SSH1Q8WYL5 1049 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 JADE3Q92613 823 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 SKA1Q96BD8 255 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 TCTN2Q96GX1 697 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 NEUROD6Q96NK8 337 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 MAP3K14Q99558 947 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 SAGE1Q9NXZ1 904 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.98□□□□□ -1.451e-7■■■□□ 15.5
LSM5-205ENST00000409952 BACE2Q9Y5Z0 518 aa5.98□□□□□ -1.45
LSM5-205ENST00000409952 TMEM82A0PJX8 343 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 FAM227AF5H4B4 570 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 H0Y8X5 98 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 STXBP3O00186 592 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 PRAMEF1O95521 474 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 GLI1P08151 1106 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 LTKP29376 864 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 IFIT5Q13325 482 aaKnown RBP5.97□□□□□ -1.45
LSM5-205ENST00000409952 SEMA5AQ13591 1074 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 CLEC16AQ2KHT3 1053 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 HYIQ5T013 277 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 C16orf59Q7L2K0 433 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 CLASRPQ8N2M8 674 aaKnown RBP5.97□□□□□ -1.45
LSM5-205ENST00000409952 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
LSM5-205ENST00000409952 ZNF610Q8N9Z0 462 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 CCT6BQ92526 530 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 TMEM169Q96HH4 297 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 KIRREL1Q96J84 757 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 TBATAQ96M53 351 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 MCMBPQ9BTE3 642 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 CRB3Q9BUF7 120 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 BOCQ9BWV1 1114 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 GTPBP4Q9BZE4 634 aaKnown RBP5.97□□□□□ -1.45
LSM5-205ENST00000409952 ASCC2Q9H1I8 757 aaPredicted RBP5.97□□□□□ -1.45
LSM5-205ENST00000409952 TMEM60Q9H2L4 133 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 GPRC5CQ9NQ84 441 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 TMEFF2Q9UIK5 374 aaPredicted RBP5.97□□□□□ -1.45
LSM5-205ENST00000409952 FBXO2Q9UK22 296 aaPredicted RBP5.97□□□□□ -1.45
LSM5-205ENST00000409952 SPO11Q9Y5K1 396 aa5.97□□□□□ -1.45
LSM5-205ENST00000409952 hCG_1642624A0A1W2PR95 340 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 NOTOA8MTQ0 251 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 RASA4BC9J798 803 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 ARNTLO00327 626 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 AURKAO14965 403 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 RASA4O43374 803 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 RNASEH2AO75792 299 aaKnown RBP5.96□□□□□ -1.46
LSM5-205ENST00000409952 TUSC2O75896 110 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 POU2F2P09086 479 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 CTSKP43235 329 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 GRK6P43250 576 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 SMAD3P84022 425 aaKnown RBP5.96□□□□□ -1.46
LSM5-205ENST00000409952 LLGL1Q15334 1064 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 SMAD2Q15796 467 aaKnown RBP5.96□□□□□ -1.46
LSM5-205ENST00000409952 KCNMB1Q16558 191 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 KIAA0753Q2KHM9 967 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 TUBB8Q3ZCM7 444 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 LDHAL6AQ6ZMR3 332 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 PTRH1Q86Y79 214 aaKnown RBP5.96□□□□□ -1.46
LSM5-205ENST00000409952 SLC41A1Q8IVJ1 513 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 CCDC103Q8IW40 242 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 GRAMD1CQ8IYS0 662 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 ORAI2Q96SN7 254 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 ZDHHC5Q9C0B5 715 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 SMOC1Q9H4F8 434 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 IPPKQ9H8X2 491 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 ARFGAP3Q9NP61 516 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 CHST7Q9NS84 486 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 LRCH1Q9Y2L9 728 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 PCDHGB6Q9Y5F9 930 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 PCDHGB3Q9Y5G1 929 aa5.96□□□□□ -1.46
LSM5-205ENST00000409952 C2orf71A6NGG8 1288 aa5.95□□□□□ -1.46
LSM5-205ENST00000409952 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
LSM5-205ENST00000409952 H3BML4 177 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms