RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PTGDRQ13258 359 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 NBR1Q14596 966 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 MTERF2Q49AM1 385 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 CNKSR3Q6P9H4 555 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 OTUD6AQ7L8S5 288 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 OTOP2Q7RTS6 562 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 C4orf19Q8IY42 314 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 METTL13Q8N6R0 699 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 CCDC43Q96MW1 224 aaKnown RBP12.22□□□□□ -0.45
CHMP3-205ENST00000409810 EIF2AK1Q9BQI3 630 aaKnown RBP12.22□□□□□ -0.45
CHMP3-205ENST00000409810 NIFKQ9BYG3 293 aaKnown RBP12.22□□□□□ -0.45
CHMP3-205ENST00000409810 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.22□□□□□ -0.45
CHMP3-205ENST00000409810 PCDHB6Q9Y5E3 794 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 TRPV2Q9Y5S1 764 aa12.22□□□□□ -0.45
CHMP3-205ENST00000409810 POTEMA6NI47 508 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 ZBBXA8MT70 800 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 ZBTB42B2RXF5 422 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 STX6O43752 255 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 NBNO60934 754 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 C22orf31O95567 290 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 YWHABP31946 246 aaKnown RBP12.21□□□□□ -0.45
CHMP3-205ENST00000409810 PRPHP41219 470 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 TECP42680 631 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHMP3-205ENST00000409810 CYP4A11Q02928 519 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 BECN1Q14457 450 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 C16orf59Q7L2K0 433 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 TPH2Q8IWU9 490 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 SEPT8Q92599 483 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 APBB2Q92870 758 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-205ENST00000409810 TUFT1Q9NNX1 390 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 CDY2AQ9Y6F7 541 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 SQORQ9Y6N5 450 aa12.21□□□□□ -0.45
CHMP3-205ENST00000409810 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.46
CHMP3-205ENST00000409810 GBF1Q92538 1859 aa12.21□□□□□ -0.46
CHMP3-205ENST00000409810 KDM3AQ9Y4C1 1321 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-205ENST00000409810 ABHD14A-ACY1A0A1B0GW23 586 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-205ENST00000409810 LYPLA2O95372 231 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 KCNJ6P48051 423 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-205ENST00000409810 CDC42EP1Q00587 391 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 MGAT3Q09327 533 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 IKBKEQ14164 716 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 CTTNQ14247 550 aaKnown RBP12.2□□□□□ -0.46
CHMP3-205ENST00000409810 TARBP2Q15633 366 aaKnown RBP12.2□□□□□ -0.46
CHMP3-205ENST00000409810 ODR4Q5SWX8 454 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
CHMP3-205ENST00000409810 EFCAB12Q6NXP0 572 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 C4orf32Q8N8J7 132 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 CEP170P1Q96L14 293 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 CYP26B1Q9NR63 512 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 RGL1Q9NZL6 768 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 AKT3Q9Y243 479 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 SLC4A7Q9Y6M7 1214 aa12.2□□□□□ -0.46
CHMP3-205ENST00000409810 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
CHMP3-205ENST00000409810 SLITRK3O94933 977 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 CHRNA1P02708 482 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 GHRP10912 638 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 MUTP22033 750 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 RFC5P40937 340 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 DNM2P50570 870 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 POLGP54098 1239 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-205ENST00000409810 SMAD3P84022 425 aaKnown RBP12.19□□□□□ -0.46
CHMP3-205ENST00000409810 PDIA5Q14554 519 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 MBTPS1Q14703 1052 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 PLEKHG4Q58EX7 1191 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 XKR9Q5GH70 373 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 TSHZ1Q6ZSZ6 1077 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 FAM43BQ6ZT52 329 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-205ENST00000409810 ANO5Q75V66 913 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 KIAA0319LQ8IZA0 1049 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 SLC7A3Q8WY07 619 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 ZBTB10Q96DT7 871 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 SLC9A7Q96T83 725 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 HSD17B14Q9BPX1 270 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 POLR3CQ9BUI4 534 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-205ENST00000409810 IFIH1Q9BYX4 1025 aaKnown RBP12.19□□□□□ -0.46
CHMP3-205ENST00000409810 CELF4Q9BZC1 486 aaKnown RBP12.19□□□□□ -0.46
CHMP3-205ENST00000409810 SUGCTQ9HAC7 445 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 MTMR6Q9Y217 621 aa12.19□□□□□ -0.46
CHMP3-205ENST00000409810 MYO9BQ13459 2157 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 PTPRSQ13332 1948 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 MAFO75444 373 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-205ENST00000409810 STBD1O95210 358 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHMP3-205ENST00000409810 RPA1P27694 616 aa12.18□□□□□ -0.46
CHMP3-205ENST00000409810 FXR1P51114 621 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHMP3-205ENST00000409810 CLCN3P51790 818 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms