RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PDXDC2PQ6P474 469 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 SESTD1Q86VW0 696 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 C4orf19Q8IY42 314 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 BANK1Q8NDB2 785 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 C16orf70Q9BSU1 422 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 TRMT13Q9NUP7 481 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 RGL1Q9NZL6 768 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 KCNH3Q9ULD8 1083 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 TELO2Q9Y4R8 837 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 SCN10AQ9Y5Y9 1956 aa18.46■□□□□ 0.55
TSPAN4-208ENST00000409531 POTEB3A0JP26 581 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 LYPLA2O95372 231 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 ZNF286BP0CG31 522 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 MFSD10Q14728 455 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 KARSQ15046 597 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 KIAA0753Q2KHM9 967 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 RRAGBQ5VZM2 374 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 POTEBQ6S5H4 581 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 CKAP2LQ8IYA6 745 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 IQUBQ8NA54 791 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 PPP1R13LQ8WUF5 828 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 FAM167AQ96KS9 214 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 NACC1Q96RE7 527 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 DDX19AQ9NUU7 478 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 ERAP1Q9NZ08 941 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 STK17AQ9UEE5 414 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 HPSEQ9Y251 543 aa18.45■□□□□ 0.54
TSPAN4-208ENST00000409531 H3BRB1 525 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 XRCC6P12956 609 aaKnown RBP eCLIP18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 SYKP43405 635 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 FAM160A1Q05DH4 1040 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 GRB10Q13322 594 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 TMEM119Q4V9L6 283 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 OTUD6AQ7L8S5 288 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 TDHQ8IZJ6 230 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 C7orf31Q8N865 590 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 PCYT2Q99447 389 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 HIPK3Q9H422 1215 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 CUEDC2Q9H467 287 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 HDAC6Q9UBN7 1215 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 USP25Q9UHP3 1055 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 KIAA1024Q9UPX6 916 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 DNM3Q9UQ16 869 aa18.44■□□□□ 0.54
TSPAN4-208ENST00000409531 POLR2DO15514 142 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 MBD3O95983 291 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 PLCG1P19174 1290 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 STAT6P42226 847 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 NDUFA8P51970 172 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 PRKCEQ02156 737 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 UGCGQ16739 394 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 XKR3Q5GH77 459 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 POTEGQ6S5H5 508 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 TMEM199Q8N511 208 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 PDILTQ8N807 584 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 SLC17A8Q8NDX2 589 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 CCDC34Q96HJ3 373 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 CCDC43Q96MW1 224 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 PNMA5Q96PV4 448 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 PPP1R12CQ9BZL4 782 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 NRBP2Q9NSY0 501 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 GTF2IRD1Q9UHL9 959 aa18.43■□□□□ 0.54
TSPAN4-208ENST00000409531 ARID2Q68CP9 1835 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 OATP04181 439 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 CYP2C9P11712 490 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 YWHABP31946 246 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 CYP2C18P33260 490 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 FPGSQ05932 587 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 ECM1Q16610 540 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 PTGISQ16647 500 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 GDF6Q6KF10 455 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 TRIM50Q86XT4 487 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 BBXQ8WY36 941 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 PLIN2Q99541 437 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 NOC4LQ9BVI4 516 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 PANK2Q9BZ23 570 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 GOLPH3LQ9H4A5 285 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 NOD1Q9Y239 953 aa18.42■□□□□ 0.54
TSPAN4-208ENST00000409531 ZNF862O60290 1169 aa18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 ZNF202O95125 648 aa18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 CEP57L1Q8IYX8 460 aa18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 FMR1NBQ8N0W7 255 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 ATP8B4Q8TF62 1192 aa18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 DHX58Q96C10 678 aa18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 ANKEF1Q9NU02 776 aa18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 WRAP73Q9P2S5 460 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 DBR1Q9UK59 544 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-208ENST00000409531 A0A087X0B3 334 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 HBP1O60381 514 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 KINO60870 393 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 EYA4O95677 639 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 MARK3P27448 753 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.543e-9■■■□□ 16.8
TSPAN4-208ENST00000409531 PLCB4Q15147 1175 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 SHHQ15465 462 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 ENGASEQ8NFI3 743 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 LARP4BQ92615 738 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 RAD54LQ92698 747 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms