RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 CUL5Q93034 780 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 TBC1D31Q96DN5 1066 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 MRIQ9BWK5 157 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 BAIAP2L1Q9UHR4 511 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 PGRMC1O00264 195 aaKnown RBP16.84■□□□□ 0.29
LIMS2-205ENST00000409455 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-205ENST00000409455 TECP42680 631 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 POLR2FP61218 127 aaKnown RBP16.84■□□□□ 0.29
LIMS2-205ENST00000409455 LETM2Q2VYF4 491 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 HOOK2Q96ED9 719 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 ZNF277Q9NRM2 450 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-205ENST00000409455 ADAMTS1Q9UHI8 967 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 PPP1R12BO60237 982 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-205ENST00000409455 KIF4AO95239 1232 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 CACNB3P54284 484 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 ARID5AQ03989 594 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 KLHL30Q0D2K2 578 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 RAPGEF1Q13905 1077 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 LSM14BQ9BX40 385 aaKnown RBP16.84■□□□□ 0.29
LIMS2-205ENST00000409455 NEUROG2Q9H2A3 272 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
LIMS2-205ENST00000409455 A0A087X0T9 212 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 CCT8L1PA6NM43 557 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 FAM228BP0C875 321 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 GNAQP50148 359 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 USP11P51784 963 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 IFI16Q16666 785 aaKnown RBP16.83■□□□□ 0.28
LIMS2-205ENST00000409455 TMC3Q7Z5M5 1100 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 AP1M1Q9BXS5 423 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 PACSIN1Q9BY11 444 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 MTFR1LQ9H019 292 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 RIC8AQ9NPQ8 531 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 CCDC188H7C350 402 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 CTNND1O60716 968 aaKnown RBP16.83■□□□□ 0.28
LIMS2-205ENST00000409455 NOL4O94818 638 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
LIMS2-205ENST00000409455 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-205ENST00000409455 DYMQ7RTS9 669 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 ZFPM1Q8IX07 1006 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
LIMS2-205ENST00000409455 BARHL2Q9NY43 387 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 PIM2Q9P1W9 311 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-205ENST00000409455 COL4A3BPQ9Y5P4 624 aa16.83■□□□□ 0.28
LIMS2-205ENST00000409455 BTNL10A8MVZ5 291 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 RTN2O75298 545 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 GSTA1P08263 222 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 POLD1P28340 1107 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 TGFB2P61812 414 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 GABPAQ06546 454 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 ENOX2Q16206 610 aaKnown RBP16.82■□□□□ 0.28
LIMS2-205ENST00000409455 ERMARDQ5T6L9 678 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 NEDD1Q8NHV4 660 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 CENPTQ96BT3 561 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.82■□□□□ 0.28
LIMS2-205ENST00000409455 FAM129AQ9BZQ8 928 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 DDX47Q9H0S4 455 aaKnown RBP16.82■□□□□ 0.28
LIMS2-205ENST00000409455 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
LIMS2-205ENST00000409455 NOC2LQ9Y3T9 749 aaKnown RBP16.82■□□□□ 0.28
LIMS2-205ENST00000409455 MYMKA6NI61 221 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 F8VZ95 297 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 STXBP3O00186 592 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 KRIT1O00522 736 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 DAPK3O43293 454 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 HOXA7P31268 230 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-205ENST00000409455 FLT3P36888 993 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 EIF3BP55884 814 aaKnown RBP16.81■□□□□ 0.28
LIMS2-205ENST00000409455 DHX9Q08211 1270 aaKnown RBP16.81■□□□□ 0.28
LIMS2-205ENST00000409455 KRT25Q7Z3Z0 450 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 CCDC63Q8NA47 563 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 CCDC26Q8TAB7 109 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 TMEM47Q9BQJ4 181 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 MMTAG2Q9BU76 263 aaKnown RBP16.81■□□□□ 0.28
LIMS2-205ENST00000409455 RAD17O75943 681 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 TCP10Q12799 353 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
LIMS2-205ENST00000409455 ASIC2Q16515 512 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 C10orf76Q5T2E6 689 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 HOOK3Q86VS8 718 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 MAB21L3Q8N8X9 362 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 FAM133AQ8N9E0 248 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 LARP4BQ92615 738 aaKnown RBP16.81■□□□□ 0.28
LIMS2-205ENST00000409455 SLITRK6Q9H5Y7 841 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 SLC24A3Q9HC58 644 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 BATF3Q9NR55 127 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 SERPINA10Q9UK55 444 aa16.81■□□□□ 0.28
LIMS2-205ENST00000409455 BHMG1C9JSJ3 638 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-205ENST00000409455 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
LIMS2-205ENST00000409455 CCHCR1Q8TD31 782 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIMS2-205ENST00000409455 AMACRQ9UHK6 382 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 SERPINB13Q9UIV8 391 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 245.9 ms