RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MOB2Q70IA6 237 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 SEC14L1Q92503 715 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 PBKQ96KB5 322 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 CCDC42Q96M95 316 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 ZIC5Q96T25 663 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 FAM192AQ9GZU8 254 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 L3MBTL1Q9Y468 752 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 GMEB1Q9Y692 573 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 SLC4A7Q9Y6M7 1214 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 PITPNM2Q9BZ72 1349 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 SSU72P8A0A1W2PR75 194 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 DPPA5A6NC42 116 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 ACADSP16219 412 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 HUNKP57058 714 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 NCALDP61601 193 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 GUCY2DQ02846 1103 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 COL13A1Q5TAT6 717 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 HHATQ5VTY9 493 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 ASRGL1Q7L266 308 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 ZSCAN29Q8IWY8 852 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 NELFBQ8WX92 580 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 PPP1R14BQ96C90 147 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 PGM2Q96G03 612 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 NOX5Q96PH1 765 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 VCXQ9H320 206 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 EXOC1Q9NV70 894 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 SAMD15Q9P1V8 674 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 CNOT8Q9UFF9 292 aaKnown RBP11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 TMCO1Q9UM00 188 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 CAPN6Q9Y6Q1 641 aa11.58□□□□□ -0.56
NIF3L1-204ENST00000409357 ZNF263O14978 683 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 FOXP2O15409 715 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ZBTB43O43298 467 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 CIAO1O76071 339 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 OAS1P00973 400 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 FGAP02671 866 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ECHS1P30084 290 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 GBP1P32455 592 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ALDH5A1P51649 535 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 GRIN1Q05586 938 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 PPP2R5BQ15173 497 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 TAF11Q15544 211 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 UAP1Q16222 522 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 PARP6Q2NL67 630 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 KLHDC7AQ5VTJ3 777 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 RRAGBQ5VZM2 374 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ANO7Q6IWH7 933 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 NFXL1Q6ZNB6 911 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ZNF467Q7Z7K2 595 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 FAM114A1Q8IWE2 563 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 DIS3L2Q8IYB7 885 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 GRAMD1CQ8IYS0 662 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ADSSL1Q8N142 457 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 PRMT6Q96LA8 375 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 AIFM3Q96NN9 605 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 INPP4AQ96PE3 977 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 IFIH1Q9BYX4 1025 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ZWILCHQ9H900 591 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 DMAP1Q9NPF5 467 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 FAM217BQ9NTX9 383 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 FZD1Q9UP38 647 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 PHF24Q9UPV7 400 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 PAPPA2Q9BXP8 1791 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 SSC5DA1L4H1 1573 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 ABCB11O95342 1321 aa11.57□□□□□ -0.56
NIF3L1-204ENST00000409357 CLRN2A0PK11 232 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 MACROD2A1Z1Q3 448 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 TRIM75PA6NK02 468 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 ZNF213O14771 459 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 FAM163BP0C2L3 166 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 RARAP10276 462 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 IBSPP21815 317 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 ADORA1P30542 326 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 MMP13P45452 471 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 FKBP1AP62942 108 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 MXRA7P84157 204 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 PPARAQ07869 468 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 CCDC15Q0P6D6 951 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 PABPC1LQ4VXU2 614 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 IRGCQ6NXR0 463 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 NFRKBQ6P4R8 1299 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 HOOK3Q86VS8 718 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 ENDOVQ8N8Q3 282 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 NCSTNQ92542 709 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 RAB3IPQ96QF0 476 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 TMEM109Q9BVC6 243 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 LUC7LQ9NQ29 371 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 WBP1LQ9NX94 342 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 LRWD1Q9UFC0 647 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 HDAC9Q9UKV0 1011 aa11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-204ENST00000409357 ATP8B3O60423 1300 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms