RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 CHD3Q12873 2000 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SEMA3BQ13214 749 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DNAJC3Q13217 504 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SEMA3FQ13275 785 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 IQGAP2Q13576 1575 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FZD2Q14332 565 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PIGHQ14442 188 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ARID5BQ14865 1188 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CDSNQ15517 529 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ZRSR2Q15696 482 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SMAD1Q15797 465 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DUSP28Q4G0W2 176 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CCDC157Q569K6 752 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SDK2Q58EX2 2172 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 C6orf118Q5T5N4 469 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CDC42BPGQ6DT37 1551 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TMEM132EQ6IEE7 984 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GDF6Q6KF10 455 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 HEPHL1Q6MZM0 1159 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MFSD5Q6N075 450 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ZNF746Q6NUN9 644 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ABHD17CQ6PCB6 329 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SUSD1Q6UWL2 747 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PPP1R3FQ6ZSY5 799 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 USP53Q70EK8 1073 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DDX46Q7L014 1031 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TMEM200AQ86VY9 491 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ERICH1Q86X53 443 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CEP97Q8IW35 865 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 COL27A1Q8IZC6 1860 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 NXPE1Q8N323 547 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TMEM199Q8N511 208 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SMRP1Q8NCR6 262 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FBXO22Q8NEZ5 403 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 HELBQ8NG08 1087 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PJA1Q8NG27 643 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KNL1Q8NG31 2342 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FAM174AQ8TBP5 190 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GPR152Q8TDT2 470 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KCNE4Q8WWG9 221 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GBF1Q92538 1859 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TAF15Q92804 592 aaKnown RBP eCLIP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 VWCEQ96DN2 955 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MRPL38Q96DV4 380 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SLC10A4Q96EP9 437 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 C14orf79Q96F83 325 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FUBP3Q96I24 572 aaKnown RBP eCLIP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ZNF594Q96JF6 807 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MSLNLQ96KJ4 702 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CAMK1GQ96NX5 476 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KLHL5Q96PQ7 755 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ATOH8Q96SQ7 321 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TBCBQ99426 244 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GPATCH1Q9BRR8 931 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PI4K2AQ9BTU6 479 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 BCL2L13Q9BXK5 485 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MFRPQ9BY79 579 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ENKD1Q9H0I2 346 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 L2HGDHQ9H9P8 463 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KCNK13Q9HB14 408 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CHST11Q9NPF2 352 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ZNF71Q9NQZ8 489 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 EIF4ENIF1Q9NRA8 985 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 YAE1D1Q9NRH1 226 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GEMIN8Q9NWZ8 242 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MED29Q9NX70 200 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 NRXN2Q9P2S2 1712 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MAGEC2Q9UBF1 373 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 COPG2Q9UBF2 871 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TRHDEQ9UKU6 1024 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PCDHB10Q9UN67 800 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SCAF8Q9UPN6 1271 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PLEKHA6Q9Y2H5 1048 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 EPB41L3Q9Y2J2 1087 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 NR2E1Q9Y466 385 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PCDHGB7Q9Y5F8 929 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TNFRSF18Q9Y5U5 241 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ABCA1O95477 2261 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CHD2O14647 1828 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 BTAF1O14981 1849 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TMEM2Q9UHN6 1383 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 BCORQ6W2J9 1755 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DLEC1Q9Y238 1755 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ADGRA3Q8IWK6 1321 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MYBBP1AQ9BQG0 1328 aaKnown RBP0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MGAMO43451 1857 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 UBR3Q6ZT12 1888 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TANC1Q9C0D5 1861 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TNS3Q68CZ2 1445 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SLX4Q8IY92 1834 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DIDO1Q9BTC0 2240 aaKnown RBP0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CLRN2A0PK11 232 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TLCD2A6NGC4 264 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 C16orf90A8MZG2 172 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 WDR64B1ANS9 1081 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PATE3B3GLJ2 98 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CHURC1-FNTBB4DL54 471 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TCP11X1B4DZS4 312 aa0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 POLRMTO00411 1230 aaKnown RBP0.16□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SEMA3EO15041 775 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms