RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 FAM133BQ5BKY9 247 aaKnown RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 SOGA3Q5TF21 947 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 TBC1D1Q86TI0 1168 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 MAPKAPK5Q8IW41 473 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 MAGEC3Q8TD91 643 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 ATXN2LQ8WWM7 1075 aaKnown RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 GLG1Q92896 1179 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 THOC1Q96FV9 657 aaKnown RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 CALR3Q96L12 384 aaKnown RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 LAMB2P55268 1798 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 GOLGB1Q14789 3259 aaKnown RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 TLDC2A0PJX2 215 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 RTN2O75298 545 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 MMEP08473 750 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 CLTAP09496 248 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 UCHL3P15374 230 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 HIBADHP31937 336 aaKnown RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 MTMR3Q13615 1198 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 KRT79Q5XKE5 535 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 NT5DC3Q86UY8 548 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 RASGEF1CQ8N431 466 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 SEC14L1Q92503 715 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 HAS1Q92839 578 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 RNF25Q96BH1 459 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 ATP6V0A4Q9HBG4 840 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 USP17L5A8MUK1 530 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 BTNL10A8MVZ5 291 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 FGGP02679 453 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 EN1Q05925 392 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-205ENST00000404914 PSMD2Q13200 908 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 ADAM9Q13443 819 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 DAAM2Q86T65 1068 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-205ENST00000404914 DZIP1Q86YF9 867 aaKnown RBP16.9■□□□□ 0.3
ATG4B-205ENST00000404914 CCDC197Q8NCU1 140 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 ABCF3Q9NUQ8 709 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 IGSF9BQ9UPX0 1349 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 MYO1EQ12965 1108 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 AADACL2Q6P093 401 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 SPAG5Q96R06 1193 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 ELAC2Q9BQ52 826 aaKnown RBP16.9■□□□□ 0.3
ATG4B-205ENST00000404914 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
ATG4B-205ENST00000404914 SRCAPQ6ZRS2 3230 aa16.89■□□□□ 0.3
ATG4B-205ENST00000404914 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■□□□ 13.3
ATG4B-205ENST00000404914 PPFIA2O75334 1257 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 NEBLO76041 1014 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 GHRP10912 638 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 TNNI2P48788 182 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 ZNF211Q13398 564 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-205ENST00000404914 NAA25Q14CX7 972 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 CUL5Q93034 780 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 NENFQ9UMX5 172 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 SLC12A4Q9UP95 1085 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 EPS15P42566 896 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.29
ATG4B-205ENST00000404914 TMEM266Q2M3C6 531 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 SLFN11Q7Z7L1 901 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 TEX11Q8IYF3 940 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 OLIG1Q8TAK6 271 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 CEP63Q96MT8 703 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 FMO2Q99518 471 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 AZI2Q9H6S1 392 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 GOPCQ9HD26 462 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 ZDHHC18Q9NUE0 388 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 PPP1R9AQ9ULJ8 1098 aa16.89■□□□□ 0.29
ATG4B-205ENST00000404914 SPDYE3A6NKU9 549 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 CCDC188H7C350 402 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 PON1P27169 355 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 IFNAR2P48551 515 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 KCNJ2P63252 427 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 NBPF9Q3BBW0 867 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 HERC4Q5GLZ8 1057 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-205ENST00000404914 CCDC50Q8IVM0 306 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 NSMCE1Q8WV22 266 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
ATG4B-205ENST00000404914 POTEB3A0JP26 581 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 POTECB2RU33 542 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 NR2F2P24468 414 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 GBP2P32456 591 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-205ENST00000404914 SLCO1A2P46721 670 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 PRPF4BQ13523 1007 aaKnown RBP16.88■□□□□ 0.29
ATG4B-205ENST00000404914 POTEBQ6S5H4 581 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 PIGWQ7Z7B1 504 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 CLEC10AQ8IUN9 316 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
ATG4B-205ENST00000404914 PRMT1Q99873 361 aaKnown RBP16.88■□□□□ 0.29
ATG4B-205ENST00000404914 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 SLITRK6Q9H5Y7 841 aa16.88■□□□□ 0.29
ATG4B-205ENST00000404914 PLSCR1O15162 318 aa16.87■□□□□ 0.29
ATG4B-205ENST00000404914 CCDC63Q8NA47 563 aa16.87■□□□□ 0.29
ATG4B-205ENST00000404914 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
ATG4B-205ENST00000404914 HES6Q96HZ4 224 aa16.87■□□□□ 0.29
ATG4B-205ENST00000404914 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
ATG4B-205ENST00000404914 EMILIN3Q9NT22 766 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms