RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 DTX3Q8N9I9 347 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZDHHC5Q9C0B5 715 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 PUS7LQ9H0K6 701 aaKnown RBP6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 POFUT1Q9H488 388 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 TRHDEQ9UKU6 1024 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 NOC2LQ9Y3T9 749 aaKnown RBP6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 UBA6A0AVT1 1052 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 KDM1AO60341 852 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 IL18BPO95998 194 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 HSP90B1P14625 803 aaKnown RBP6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 SLC6A3Q01959 620 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 SSPNQ14714 243 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 RASSF3Q86WH2 238 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZZZ3Q8IYH5 903 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 IGDCC4Q8TDY8 1250 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZBTB8AQ96BR9 441 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 AHCYL2Q96HN2 611 aaKnown RBP6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 C11orf84Q9BUA3 381 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 ASPSCR1Q9BZE9 553 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 EPB41L4AQ9HCS5 686 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 TYW1Q9NV66 732 aaKnown RBP6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 C14orf119Q9NWQ9 140 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 ARHGAP20Q9P2F6 1191 aa6.75□□□□□ -1.33
HMGB3P19-201ENST00000403971 POLA1P09884 1462 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 FGD5Q6ZNL6 1462 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 PRLP01236 227 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 RGS3P49796 1198 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 SCAND1P57086 179 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 ERVK-21P61565 698 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 EXOSC10Q01780 885 aaKnown RBP6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 ALDH6A1Q02252 535 aaKnown RBP6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZNF648Q5T619 568 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 ATG14Q6ZNE5 492 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 C7orf31Q8N865 590 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 SIGLEC10Q96LC7 697 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 TUBGCP5Q96RT8 1024 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 TMEM209Q96SK2 561 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 TACO1Q9BSH4 297 aaKnown RBP6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 DLL4Q9NR61 685 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZFP69BQ9UJL9 534 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 RNF114Q9Y508 228 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 IRAK3Q9Y616 596 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 WDR97A6NE52 1622 aa6.74□□□□□ -1.33
HMGB3P19-201ENST00000403971 ELL2O00472 640 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 GABRDO14764 452 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 FARP2O94887 1054 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 APOL3O95236 402 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 CLEC2LP0C7M8 214 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 C1QTNF9P0C862 333 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 PI3P19957 117 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 GLDCP23378 1020 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 IARSP41252 1262 aaKnown RBP6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 ADCY1Q08828 1119 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 MYBPC3Q14896 1274 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 ABCB5Q2M3G0 1257 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 TTC38Q5R3I4 469 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 SYDE2Q5VT97 1194 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 PRAMEF9Q5VWM5 478 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 OGFOD2Q6N063 350 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 FRMD7Q6ZUT3 714 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 NME9Q86XW9 330 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 PHYKPLQ8IUZ5 450 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 STPG3Q8N7X2 389 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 MAML3Q96JK9 1138 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 FAM84AQ96KN4 292 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 ANO3Q9BYT9 981 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 GALNT8Q9NY28 637 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 CROTQ9UKG9 612 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 PMF1-BGLAPU3KQ54 211 aa6.73□□□□□ -1.33
HMGB3P19-201ENST00000403971 TARBP1Q13395 1621 aaKnown RBP6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 GOLGA8AA7E2F4 631 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 GOLGA8BA8MQT2 603 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 PRPF6O94906 941 aaKnown RBP6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 ECE1P42892 770 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 IL13RA1P78552 427 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZBTB41Q5SVQ8 909 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 UNQ6494/PRO21346Q6UXR6 183 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 CXorf67Q86X51 503 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 CBARPQ8N350 705 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 KYQ8NBH2 561 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 FNIP1Q8TF40 1166 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 TGFBRAP1Q8WUH2 860 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 FOXB1Q99853 325 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 IRF2BPLQ9H1B7 796 aa6.72□□□□□ -1.33
HMGB3P19-201ENST00000403971 ABCA10Q8WWZ4 1543 aa6.71□□□□□ -1.33
HMGB3P19-201ENST00000403971 EEA1Q15075 1411 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 K7ESF4 209 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 MT-CO1P00395 513 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 HTRA3P83110 453 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 NOLC1Q14978 699 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 CT83Q5H943 113 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 SLFN12LQ6IEE8 588 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 CNKSR3Q6P9H4 555 aa6.71□□□□□ -1.34
HMGB3P19-201ENST00000403971 LMBR1Q8WVP7 490 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms