RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 USP11P51784 963 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 ZNF844Q08AG5 666 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 KDM7AQ6ZMT4 941 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 EPN3Q9H201 632 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 TAS2R14Q9NYV8 317 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 DNM3Q9UQ16 869 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 PCNTO95613 3336 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 PGRMC1O00264 195 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 EML1O00423 815 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 SERPINB2P05120 415 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 SNHG28P0DPA3 235 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 GALCP54803 685 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 SEPT2Q15019 361 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 KRT71Q3SY84 523 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 MMS22LQ6ZRQ5 1243 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 LRRC4BQ9NT99 713 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 G3V3G9 751 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 BUB1BO60566 1050 aaPredicted RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 H2AFZP0C0S5 128 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 IL1R1P14778 569 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 ZNF76P36508 570 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 H2AFVQ71UI9 128 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 TPH2Q8IWU9 490 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 MAGOHBQ96A72 148 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 PPP1R9AQ9ULJ8 1098 aa11.53□□□□□ -0.56
PPP4R1-203ENST00000400556 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 PHF20L1A8MW92 1017 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 MEFVO15553 781 aaPredicted RBP11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 ATP2B4P23634 1241 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 CDC42EP5Q6NZY7 148 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 LRRC57Q8N9N7 239 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 WHAMMQ8TF30 809 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 ISCUQ9H1K1 167 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 DNAJC18Q9H819 358 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 DBNDD1Q9H9R9 158 aa11.52□□□□□ -0.56
PPP4R1-203ENST00000400556 MEIS2O14770 477 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 EVI5O60447 810 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 MYCT1Q8N699 235 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 SLC35C1Q96A29 364 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 CD248Q9HCU0 757 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 SBF2Q86WG5 1849 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 GNA14O95837 355 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 TNFRSF8P28908 595 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 IFFO1Q0D2I5 559 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 LNX1Q8TBB1 728 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 SYN2Q92777 582 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 ARHGEF26Q96DR7 871 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 TMBIM4Q9HC24 238 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 ERVK-5Q9HDB9 667 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 ACP6Q9NPH0 428 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 ASTN1O14525 1302 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 CDK5RAP2Q96SN8 1893 aa11.52□□□□□ -0.57
PPP4R1-203ENST00000400556 GAKO14976 1311 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 DDTLA6NHG4 134 aaPredicted RBP11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 TISP43B9A030 160 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 FLOT1O75955 427 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 HSPA9P38646 679 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 USP8P40818 1118 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SLCO1A2P46721 670 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 EPHA7Q15375 998 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 DPY19L2P1Q6NXN4 242 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 BARGINQ6ZT62 677 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.51□□□□□ -0.572e-13■■■■□ 22.1
PPP4R1-203ENST00000400556 KCNMB3Q9NPA1 279 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 RNF14Q9UBS8 474 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 KRT13P13646 458 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 CPNE8Q86YQ8 564 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SIX2Q9NPC8 291 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 IGKV6D-41A0A0C4DH26 115 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 DDX39AO00148 427 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SHBGP04278 402 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 ACTN3Q08043 901 aaPredicted RBP11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SPIRE1Q08AE8 756 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SLC35G2Q8TBE7 412 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 CYFIP2Q96F07 1278 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 SNX24Q9Y343 169 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
PPP4R1-203ENST00000400556 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 PLTPP55058 493 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 ORC2Q13416 577 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 CBWD6Q4V339 395 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 CBWD3Q5JTY5 395 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 CBWD5Q5RIA9 395 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 B4GALNT4Q76KP1 1039 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms