RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FAM114A2Q9NRY5 505 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 EMILIN3Q9NT22 766 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.031e-32■□□□□ 9.9
APOB-202ENST00000399256 AJAP1Q9UKB5 411 aaPredicted RBP15.23■□□□□ 0.03
APOB-202ENST00000399256 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 LAMB2P55268 1798 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 PPIP5K2O43314 1243 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 MMEP08473 750 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 NR2F2P24468 414 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 SLC8A1P32418 973 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 MRPL12P52815 198 aaKnown RBP15.22■□□□□ 0.03
APOB-202ENST00000399256 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
APOB-202ENST00000399256 GRIK5Q16478 980 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 CCDC65Q8IXS2 484 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 CCDC24Q8N4L8 307 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 ATP8B4Q8TF62 1192 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 TCP11Q8WWU5 503 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 CNOT10Q9H9A5 744 aaKnown RBP15.22■□□□□ 0.03
APOB-202ENST00000399256 KIAA1024Q9UPX6 916 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 PCDHA2Q9Y5H9 948 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 ROBO3Q96MS0 1386 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 GHRP10912 638 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 PAX7P23759 505 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 GBP2P32456 591 aaPredicted RBP15.22■□□□□ 0.03
APOB-202ENST00000399256 DCAF17Q5H9S7 520 aaPredicted RBP15.22■□□□□ 0.03
APOB-202ENST00000399256 GPBP1Q86WP2 473 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
APOB-202ENST00000399256 STXBP5LQ9Y2K9 1186 aa15.22■□□□□ 0.03
APOB-202ENST00000399256 CETN3O15182 167 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 FLOT1O75955 427 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 GJB7Q6PEY0 223 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 NT5DC3Q86UY8 548 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 P3H4Q92791 437 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 CEP95Q96GE4 821 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 ATP6V0A4Q9HBG4 840 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 CCNL1Q9UK58 526 aaPredicted RBP15.21■□□□□ 0.03
APOB-202ENST00000399256 LDHBP07195 334 aaKnown RBP15.21■□□□□ 0.03
APOB-202ENST00000399256 CLTAP09496 248 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 H2AFZP0C0S5 128 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 CDK8P49336 464 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 FAM133BQ5BKY9 247 aaKnown RBP15.21■□□□□ 0.03
APOB-202ENST00000399256 DPY19L2P1Q6NXN4 242 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 TLDC1Q6P9B6 456 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 H2AFVQ71UI9 128 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 HAS1Q92839 578 aa15.21■□□□□ 0.03
APOB-202ENST00000399256 SUCLA2Q9P2R7 463 aaPredicted RBP15.21■□□□□ 0.03
APOB-202ENST00000399256 RGS17Q9UGC6 210 aaPredicted RBP15.21■□□□□ 0.03
APOB-202ENST00000399256 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
APOB-202ENST00000399256 SPDYE3A6NKU9 549 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 PPFIA2O75334 1257 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 KRT18P05783 430 aaKnown RBP15.21■□□□□ 0.02
APOB-202ENST00000399256 PLA2G4BP0C869 781 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 PON1P27169 355 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 CASP5P51878 434 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 RPS8P62241 208 aaKnown RBP15.21■□□□□ 0.02
APOB-202ENST00000399256 NAA25Q14CX7 972 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 SLC51AQ86UW1 340 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.02
APOB-202ENST00000399256 LRRC34Q8IZ02 419 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 CCDC63Q8NA47 563 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 UHMK1Q8TAS1 419 aaKnown RBP15.21■□□□□ 0.02
APOB-202ENST00000399256 ZNF317Q96PQ6 595 aaPredicted RBP15.21■□□□□ 0.02
APOB-202ENST00000399256 MTFR1LQ9H019 292 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 OSGEPQ9NPF4 335 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.02
APOB-202ENST00000399256 ESYT2A0FGR8 921 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 POTEB3A0JP26 581 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 POTECB2RU33 542 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 SEPT2Q15019 361 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 EXOC3L4Q17RC7 722 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 TCERG1LQ5VWI1 586 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 SPTY2D1Q68D10 685 aaPredicted RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 POTEBQ6S5H4 581 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 SLFN11Q7Z7L1 901 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 TBC1D1Q86TI0 1168 aaPredicted RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 ANKS4BQ8N8V4 417 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 LMBR1Q8WVP7 490 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 SEC14L1Q92503 715 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 STAMBPL1Q96FJ0 436 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 AZI2Q9H6S1 392 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 BZW2Q9Y6E2 419 aaKnown RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 BUB1BO60566 1050 aaPredicted RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 AFPP02771 609 aaKnown RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 MYCNP04198 464 aaPredicted RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 RXRBP28702 533 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 HOOK3Q86VS8 718 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 CUL5Q93034 780 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 ELAC2Q9BQ52 826 aaKnown RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 EPB41L4BQ9H329 900 aa15.2■□□□□ 0.02
APOB-202ENST00000399256 ARMCX3Q9UH62 379 aaPredicted RBP15.2■□□□□ 0.02
APOB-202ENST00000399256 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.021e-323■■■■■ 32.7
APOB-202ENST00000399256 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 POU5F1Q01860 360 aaKnown RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 UBAP2Q5T6F2 1119 aaKnown RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 SMIM5Q71RC9 77 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 GLG1Q92896 1179 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 HES6Q96HZ4 224 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms