RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 NR3C1P04150 777 aa16.52■□□□□ 0.24
COL25A1-203ENST00000399132 PNMA6AP0CW24 399 aaPredicted RBP16.52■□□□□ 0.24
COL25A1-203ENST00000399132 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.24
COL25A1-203ENST00000399132 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.24
COL25A1-203ENST00000399132 FAM178BQ8IXR5 827 aa16.52■□□□□ 0.24
COL25A1-203ENST00000399132 NACC1Q96RE7 527 aa16.52■□□□□ 0.24
COL25A1-203ENST00000399132 PSMB7Q99436 277 aa16.52■□□□□ 0.24
COL25A1-203ENST00000399132 TUFT1Q9NNX1 390 aa16.52■□□□□ 0.24
COL25A1-203ENST00000399132 ADM5C9JUS6 153 aa16.52■□□□□ 0.23
COL25A1-203ENST00000399132 HIP1RO75146 1068 aa16.52■□□□□ 0.23
COL25A1-203ENST00000399132 CYLC1P35663 651 aaPredicted RBP16.52■□□□□ 0.23
COL25A1-203ENST00000399132 NPEPPSP55786 919 aa16.52■□□□□ 0.23
COL25A1-203ENST00000399132 SOX10P56693 466 aa16.52■□□□□ 0.23
COL25A1-203ENST00000399132 SETQ01105 290 aaPredicted RBP16.52■□□□□ 0.23
COL25A1-203ENST00000399132 GJB7Q6PEY0 223 aa16.52■□□□□ 0.23
COL25A1-203ENST00000399132 CAPZA3Q96KX2 299 aa16.52■□□□□ 0.23
COL25A1-203ENST00000399132 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.23
COL25A1-203ENST00000399132 ARMCX3Q9UH62 379 aaPredicted RBP16.52■□□□□ 0.23
COL25A1-203ENST00000399132 DHX15O43143 795 aaKnown RBP16.51■□□□□ 0.23
COL25A1-203ENST00000399132 NOL4O94818 638 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 EPHA7Q15375 998 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 MEA1Q16626 185 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 MOB2Q70IA6 237 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL25A1-203ENST00000399132 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 AGO4Q9HCK5 861 aaKnown RBP16.51■□□□□ 0.23
COL25A1-203ENST00000399132 TUBB4AP04350 444 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 DNA2P51530 1060 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 TMEM132BQ14DG7 1078 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 PADI6Q6TGC4 694 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 BAP1Q92560 729 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 MLXIPQ9HAP2 919 aa16.51■□□□□ 0.23
COL25A1-203ENST00000399132 TGFB1I1O43294 461 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 TADA3O75528 432 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 KIF11P52732 1056 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 USP14P54578 494 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 EPM2AIP1Q7L775 607 aaPredicted RBP16.5■□□□□ 0.23
COL25A1-203ENST00000399132 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 PDCD2LQ9BRP1 358 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 PXMP2Q9NR77 195 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 PLAGL2Q9UPG8 496 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 ATP1A1P05023 1023 aaKnown RBP16.5■□□□□ 0.23
COL25A1-203ENST00000399132 SPA17Q15506 151 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 NAPGQ99747 312 aaPredicted RBP16.5■□□□□ 0.23
COL25A1-203ENST00000399132 HINFPQ9BQA5 517 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 KIFC3Q9BVG8 833 aa16.5■□□□□ 0.23
COL25A1-203ENST00000399132 FHDC1Q9C0D6 1143 aaPredicted RBP16.5■□□□□ 0.23
COL25A1-203ENST00000399132 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
COL25A1-203ENST00000399132 POLR2AP24928 1970 aaKnown RBP16.5■□□□□ 0.23
COL25A1-203ENST00000399132 CALUO43852 315 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-203ENST00000399132 XRCC5P13010 732 aaKnown RBP16.49■□□□□ 0.23
COL25A1-203ENST00000399132 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
COL25A1-203ENST00000399132 RASSF4Q9H2L5 321 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 AS3MTQ9HBK9 375 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 JADE2Q9NQC1 790 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 K7ENM7 598 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
COL25A1-203ENST00000399132 CCNE2O96020 404 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 TRIM49P0CI25 452 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 TRIM49CP0CI26 452 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-203ENST00000399132 NAP1L1P55209 391 aaKnown RBP16.49■□□□□ 0.23
COL25A1-203ENST00000399132 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 DAW1Q8N136 415 aa16.49■□□□□ 0.23
COL25A1-203ENST00000399132 BUB1O43683 1085 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 TLR2O60603 784 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 KRT83P78385 493 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 FSTL1Q12841 308 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 PTPROQ16827 1216 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 TREML2Q5T2D2 321 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
COL25A1-203ENST00000399132 ZSWIM2Q8NEG5 633 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 RIT2Q99578 217 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 TYW1Q9NV66 732 aaKnown RBP16.48■□□□□ 0.23
COL25A1-203ENST00000399132 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 UBIAD1Q9Y5Z9 338 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 RPTORQ8N122 1335 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 ZMYM2Q9UBW7 1377 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 MOCS3O95396 460 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 TMOD4Q9NZQ9 345 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 TRAF3IP3Q9Y228 551 aa16.48■□□□□ 0.23
COL25A1-203ENST00000399132 A0A1W2PQJ5 194 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 PDXKO00764 312 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 BACH1O14867 736 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 ZNF185O15231 689 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 P4HBP07237 508 aaKnown RBP16.47■□□□□ 0.23
COL25A1-203ENST00000399132 NR3C2P08235 984 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 RHOXF2BP0C7M4 288 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 LMNB1P20700 586 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 YWHABP31946 246 aaKnown RBP16.47■□□□□ 0.23
COL25A1-203ENST00000399132 KIF5AQ12840 1032 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 VGLL4Q14135 290 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 EDRF1Q3B7T1 1238 aa16.47■□□□□ 0.23
COL25A1-203ENST00000399132 ZNF720Q7Z2F6 126 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms