RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 YWHAGP61981 247 aaKnown RBP eCLIP17.67■□□□□ 0.42
CTDSP2-201ENST00000398073 GPC5P78333 572 aa17.67■□□□□ 0.42
CTDSP2-201ENST00000398073 PPP2R5AQ15172 486 aa17.67■□□□□ 0.42
CTDSP2-201ENST00000398073 NLGN1Q8N2Q7 840 aa17.67■□□□□ 0.42
CTDSP2-201ENST00000398073 GABPB2Q8TAK5 448 aaPredicted RBP17.67■□□□□ 0.42
CTDSP2-201ENST00000398073 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 AFAP1L2Q8N4X5 818 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 LRRD1A4D1F6 860 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 PMS2P54278 862 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 TMEM179Q6ZVK1 233 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 RAB3IL1Q8TBN0 382 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 PIGOQ8TEQ8 1089 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 RIN2Q8WYP3 895 aaPredicted RBP17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 FRMD5Q7Z6J6 570 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 KSR1Q8IVT5 923 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 PABPN1LA6NDY0 278 aaKnown RBP17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 TRIM66O15016 1216 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 ABCD1P33897 745 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 WDR93Q6P2C0 686 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 NIM1KQ8IY84 436 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 SMC1BQ8NDV3 1235 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 RFFLQ8WZ73 363 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 HPS3Q969F9 1004 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 SUGCTQ9HAC7 445 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 ANKFY1Q9P2R3 1169 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 FBXL5Q9UKA1 691 aa17.66■□□□□ 0.42
CTDSP2-201ENST00000398073 MEFVO15553 781 aaPredicted RBP17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 CHRNA3P32297 505 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 BRDTQ58F21 947 aaPredicted RBP17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 MMGT1Q8N4V1 131 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 N4BP2L2Q92802 583 aaPredicted RBP17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 GPR101Q96P66 508 aaPredicted RBP17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 FRMD3A2A2Y4 597 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 POTEFA5A3E0 1075 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 ANXA13P27216 316 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 GUCY1A3Q02108 690 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 TRIP13Q15645 432 aaPredicted RBP17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 SCYL2Q6P3W7 929 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 POTEGQ6S5H5 508 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 POTEEQ6S8J3 1075 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 MAP7D3Q8IWC1 876 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 GDAP1Q8TB36 358 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 ERGIC2Q96RQ1 377 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 PNKPQ96T60 521 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 TTBK2Q6IQ55 1244 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 TAB3Q8N5C8 712 aaPredicted RBP17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 SEL1LQ9UBV2 794 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 L1RE1Q9UN81 338 aa17.65■□□□□ 0.42
CTDSP2-201ENST00000398073 USP17L10C9JJH3 530 aa17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 KRT1P04264 644 aa17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 CA4P22748 312 aa17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 DRAP1Q14919 205 aaPredicted RBP17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 TBC1D10BQ4KMP7 808 aaPredicted RBP17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 TRIM42Q8IWZ5 723 aa17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 SCYL3Q8IZE3 742 aa17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 CEP170P1Q96L14 293 aa17.64■□□□□ 0.42
CTDSP2-201ENST00000398073 USP11P51784 963 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 ERVK-24P63145 666 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 TROAPQ12815 778 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 BSPRYQ5W0U4 402 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 RPAINQ86UA6 219 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 FLAD1Q8NFF5 587 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 HVCN1Q96D96 273 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 AS3MTQ9HBK9 375 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 C1orf167Q5SNV9 1468 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 BAG2O95816 211 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 MSH2P43246 934 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 SH3BGRP55822 239 aaPredicted RBP17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 CHMP6Q96FZ7 201 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 TUBB6Q9BUF5 446 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 NOP53Q9NZM5 478 aaKnown RBP17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 H7C0C1 242 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 PEX19P40855 299 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 MDH1P40925 334 aaKnown RBP17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 ATP5OP48047 213 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 TOB1P50616 345 aaPredicted RBP17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
CTDSP2-201ENST00000398073 DIP2BQ9P265 1576 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 DNAJC24Q6P3W2 148 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 XXYLT1Q8NBI6 393 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 CNKSR1Q969H4 720 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 EPN3Q9H201 632 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 SEPT9Q9UHD8 586 aaPredicted RBP17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 AMACRQ9UHK6 382 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 GINS2Q9Y248 185 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 CD44P16070 742 aaKnown RBP17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 RFX1P22670 979 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 IRAK1P51617 712 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 GEN1Q17RS7 908 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 SH2D3CQ8N5H7 860 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 PFASO15067 1338 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 PDXKO00764 312 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 ZNF18P17022 549 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 CAV1Q03135 178 aa17.63■□□□□ 0.41
CTDSP2-201ENST00000398073 SLC7A3Q8WY07 619 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms