RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ENOX1Q8TC92 643 aaKnown RBP16.71■□□□□ 0.27
LSS-202ENST00000397728 HAUS2Q9NVX0 235 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 GOLGA6L7A0A1B0GV03 622 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 GFPT2O94808 682 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 NR3C1P04150 777 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 OATP04181 439 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 SMARCA1P28370 1054 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 CRY2Q49AN0 593 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 KIAA1524Q8TCG1 905 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 SREK1Q8WXA9 508 aaKnown RBP16.71■□□□□ 0.27
LSS-202ENST00000397728 ZMYND12Q9H0C1 365 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 KCNH7Q9NS40 1196 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 RAB20Q9NX57 234 aa16.71■□□□□ 0.27
LSS-202ENST00000397728 PVALEFA0A1B0GWK0 134 aa16.71■□□□□ 0.26
LSS-202ENST00000397728 MYO1FO00160 1098 aa16.71■□□□□ 0.26
LSS-202ENST00000397728 ANXA13P27216 316 aa16.71■□□□□ 0.26
LSS-202ENST00000397728 MAPK4P31152 587 aa16.71■□□□□ 0.26
LSS-202ENST00000397728 C8orf74Q6P047 294 aa16.71■□□□□ 0.26
LSS-202ENST00000397728 HAUS6Q7Z4H7 955 aa16.71■□□□□ 0.26
LSS-202ENST00000397728 CERS5Q8N5B7 392 aa16.71■□□□□ 0.26
LSS-202ENST00000397728 FAM163AQ96GL9 167 aaPredicted RBP16.71■□□□□ 0.26
LSS-202ENST00000397728 IKBKBO14920 756 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 ZNF710Q8N1W2 664 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 FAM81BQ96LP2 452 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 NDST4Q9H3R1 872 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 KIAA1586Q9HCI6 787 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 DGAT1O75907 488 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 EYA4O95677 639 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 GCLMP48507 274 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 PDIA5Q14554 519 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 UAP1Q16222 522 aaPredicted RBP16.7■□□□□ 0.26
LSS-202ENST00000397728 SIX6OS1Q8N1H7 587 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 C17orf53Q8N3J3 647 aaPredicted RBP16.7■□□□□ 0.26
LSS-202ENST00000397728 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 MTIF3Q9H2K0 278 aaKnown RBP16.7■□□□□ 0.26
LSS-202ENST00000397728 ELMSAN1Q6PJG2 1045 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 SEL1LQ9UBV2 794 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 FKBP1AP62942 108 aaKnown RBP16.7■□□□□ 0.26
LSS-202ENST00000397728 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
LSS-202ENST00000397728 BEST2Q8NFU1 509 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
LSS-202ENST00000397728 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 MAFGO15525 162 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 KCNJ6P48051 423 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 DGKDQ16760 1214 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 FKBP1CQ5VVH2 108 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 NME8Q8N427 588 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 ACTN4O43707 911 aaKnown RBP16.69■□□□□ 0.26
LSS-202ENST00000397728 HUS1O60921 280 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 CASC4Q6P4E1 433 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 CCDC89Q8N998 374 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.69■□□□□ 0.26
LSS-202ENST00000397728 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 PCDHAC2Q9Y5I4 1007 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 TYW5A2RUC4 315 aaKnown RBP16.69■□□□□ 0.26
LSS-202ENST00000397728 UPP2O95045 317 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 CYP2C8P10632 490 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 CYP2C9P11712 490 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 FAM133AQ8N9E0 248 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 SPATC1LQ9H0A9 340 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 ERAP1Q9NZ08 941 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 BZW2Q9Y6E2 419 aaKnown RBP16.69■□□□□ 0.26
LSS-202ENST00000397728 TRIM49BA6NDI0 452 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 IRX5P78411 483 aaPredicted RBP16.69■□□□□ 0.26
LSS-202ENST00000397728 PRKCEQ02156 737 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 BIRC2Q13490 618 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 LAMC2Q13753 1193 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 TRPM4Q8TD43 1214 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 MRRFQ96E11 262 aaKnown RBP16.69■□□□□ 0.26
LSS-202ENST00000397728 THAP9Q9H5L6 903 aa16.69■□□□□ 0.26
LSS-202ENST00000397728 MED7O43513 233 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 SKIV2LQ15477 1246 aaKnown RBP16.68■□□□□ 0.26
LSS-202ENST00000397728 PLA2G4FQ68DD2 849 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 OR6B2Q6IFH4 312 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 ZNF653Q96CK0 615 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 MRFAP1L1Q96HT8 127 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 ATP8B3O60423 1300 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 TBX3O15119 743 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
LSS-202ENST00000397728 ITKQ08881 620 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 MESDQ14696 234 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
LSS-202ENST00000397728 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.68■□□□□ 0.26
LSS-202ENST00000397728 EPN1Q9Y6I3 576 aaPredicted RBP16.68■□□□□ 0.26
LSS-202ENST00000397728 A6NJR5 290 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 EFNA5P52803 228 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 VGLL4Q14135 290 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 IER5Q5VY09 327 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 SCN4BQ8IWT1 228 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 THEM5Q8N1Q8 247 aa16.68■□□□□ 0.26
LSS-202ENST00000397728 NDC80O14777 642 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 CPT1AP50416 773 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 GPC3P51654 580 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 PRKCBP05771 671 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms