RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 KIAA0895Q8NCT3 520 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 FAM81BQ96LP2 452 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 MAD2L2Q9UI95 211 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 NENFQ9UMX5 172 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 NOVA2Q9UNW9 492 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 DOCK2Q92608 1830 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 BAG2O95816 211 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 EEF2P13639 858 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 RPA1P27694 616 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 CXCR5P32302 372 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 BYSLQ13895 437 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 DCAF17Q5H9S7 520 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 CCDC62Q6P9F0 684 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 USP38Q8NB14 1042 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 KLHL29Q96CT2 875 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 ATP6V1G3Q96LB4 118 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 PLVAPQ9BX97 442 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 NLRC4Q9NPP4 1024 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 AGPAT5Q9NUQ2 364 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 SERPINB13Q9UIV8 391 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 KRIT1O00522 736 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TLR2O60603 784 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 MOCS3O95396 460 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF543Q08ER8 600 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 KLHL30Q0D2K2 578 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 CALCRLQ16602 461 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 LRRC31Q6UY01 552 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 ARMC2Q8NEN0 867 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TBCKQ8TEA7 893 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 THOC1Q96FV9 657 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 CRAMP1Q96RY5 1269 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 MTUS1Q9ULD2 1270 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 WNT7AO00755 349 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 LETM2Q2VYF4 491 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 PHLDB2Q86SQ0 1253 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 PACS2Q86VP3 889 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 RHOT2Q8IXI1 618 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 IWS1Q96ST2 819 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TCHPQ9BT92 498 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TAF1DQ9H5J8 278 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TYW1Q9NV66 732 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 KCNG1Q9UIX4 513 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 NAGPAQ9UK23 515 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 FAF1Q9UNN5 650 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 AHDC1Q5TGY3 1603 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TRAF5O00463 557 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 DYNLL1P63167 89 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 DDR1Q08345 913 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 IL17AQ16552 155 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 MEI1Q5TIA1 1274 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 PHLDB3Q6NSJ2 640 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 C12orf56Q8IXR9 622 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 HVCN1Q96D96 273 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 ANKRD27Q96NW4 1050 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 PHACTR1Q9C0D0 580 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 RAB17Q9H0T7 212 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 CASQ2O14958 399 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 CTNND1O60716 968 aaKnown RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 RHBDL3P58872 404 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 ALKBH5Q6P6C2 394 aaKnown RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 HHIPL2Q6UWX4 724 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 SLC17A8Q8NDX2 589 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 LCMT1Q9UIC8 334 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 COL14A1Q05707 1796 aaKnown RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 AFDNP55196 1824 aaKnown RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 MYMKA6NI61 221 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 LRRC53A6NM62 1247 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 PDHA1P08559 390 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM253P0C7T8 217 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 RFC1P35251 1148 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 CETN1Q12798 172 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 KLHDC7AQ5VTJ3 777 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 TRMT1LQ7Z2T5 733 aaKnown RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 MAF1Q9H063 256 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 SEMA6BQ9H3T3 888 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 SCOCQ9UIL1 159 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 ATP2A1O14983 1001 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 EIF3DO15371 548 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 GGPS1O95749 300 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 NAIF1Q69YI7 327 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 ADAT2Q7Z6V5 191 aaKnown RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 CFAP61Q8NHU2 1237 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 CRYGNQ8WXF5 182 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 SLC35C1Q96A29 364 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 POLR3CQ9BUI4 534 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 RTFDC1Q9BY42 306 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 ST6GALNAC4Q9H4F1 302 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 KANSL2Q9H9L4 492 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 NFU1Q9UMS0 254 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 PLAAQ9Y263 795 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 SLIT2O94813 1529 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 hCG_2014768A0A024R1R8 64 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 RASSF10A6NK89 507 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 MAPK13O15264 365 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 SH2D4BQ5SQS7 431 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 HS2ST1Q7LGA3 356 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 PEX26Q7Z412 305 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 RASGEF1CQ8N431 466 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 INTS9Q9NV88 658 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms