RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 IFI16Q16666 785 aaKnown RBP11.11□□□□□ -0.63
FGFR1-209ENST00000397113 C4orf32Q8N8J7 132 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
FGFR1-209ENST00000397113 ECT2Q9H8V3 914 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 CTTNBP2NLQ9P2B4 639 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 ARMCX3Q9UH62 379 aaPredicted RBP11.11□□□□□ -0.63
FGFR1-209ENST00000397113 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
FGFR1-209ENST00000397113 COASYQ13057 564 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 TAF11Q15544 211 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 MEI1Q5TIA1 1274 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
FGFR1-209ENST00000397113 CAPRIN2Q6IMN6 1127 aaKnown RBP11.11□□□□□ -0.63
FGFR1-209ENST00000397113 KRT25Q7Z3Z0 450 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 FBXO25Q8TCJ0 367 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 TMEM47Q9BQJ4 181 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 PLA2G12BQ9BX93 195 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 IKZF4Q9H2S9 585 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 CEP72Q9P209 647 aa11.11□□□□□ -0.63
FGFR1-209ENST00000397113 PAPPA2Q9BXP8 1791 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 POTECB2RU33 542 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 NEFHP12036 1026 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 PRLRP16471 622 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 GNAQP50148 359 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 LACTBP83111 547 aaPredicted RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 TRIM28Q13263 835 aaKnown RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 EAPPQ56P03 285 aaPredicted RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 SLC30A10Q6XR72 485 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 UNC13DQ70J99 1090 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 ZNF571Q7Z3V5 609 aaPredicted RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 NEK9Q8TD19 979 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 ZNF622Q969S3 477 aaKnown RBP eCLIP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.1□□□□□ -0.631e-7■□□□□ 11.2
FGFR1-209ENST00000397113 NSRP1Q9H0G5 558 aaKnown RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 PLCB1Q9NQ66 1216 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 HDAC9Q9UKV0 1011 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 PCDHA12Q9UN75 941 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 CHMP2AO43633 222 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 GCNT3O95395 438 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 XRCC5P13010 732 aaKnown RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 FGFR2P21802 821 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 DDR1Q08345 913 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 BIRC3Q13489 604 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 CUL1Q13616 776 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 MESDQ14696 234 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 TAB3Q8N5C8 712 aaPredicted RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 FAM118BQ9BPY3 351 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 SEMA4AQ9H3S1 761 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 HSPA9P38646 679 aaKnown RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 ATP11AP98196 1134 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 GRB10Q13322 594 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 GRIPAP1Q4V328 841 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 HGSNATQ68CP4 663 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 TRPM8Q7Z2W7 1104 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 CCDC65Q8IXS2 484 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 DDX23Q9BUQ8 820 aaKnown RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 ZCWPW1Q9H0M4 648 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 SPATS2LQ9NUQ6 558 aaKnown RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 RNF14Q9UBS8 474 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 ASIC3Q9UHC3 531 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 PNMA3Q9UL41 463 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 INTUQ9ULD6 942 aa11.1□□□□□ -0.63
FGFR1-209ENST00000397113 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
FGFR1-209ENST00000397113 A0A1W2PQJ5 194 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 HIBADHP31937 336 aaKnown RBP11.09□□□□□ -0.63
FGFR1-209ENST00000397113 CYP2J2P51589 502 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 SATB1Q01826 763 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 UBAP2Q5T6F2 1119 aaKnown RBP11.09□□□□□ -0.63
FGFR1-209ENST00000397113 THEMIS2Q5TEJ8 643 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 RFX8Q6ZV50 586 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 CELF1Q92879 486 aaKnown RBP11.09□□□□□ -0.63
FGFR1-209ENST00000397113 GCNT4Q9P109 453 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 CPSF2Q9P2I0 782 aaKnown RBP11.09□□□□□ -0.63
FGFR1-209ENST00000397113 CACNA1SQ13698 1873 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 MYH2Q9UKX2 1941 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 SMIM24O75264 130 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 PMS2P54278 862 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 SNAP25P60880 206 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 MTM1Q13496 603 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 ARMC3Q5W041 872 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 TATDN2Q93075 761 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 EYA3Q99504 573 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 BARHL2Q9NY43 387 aa11.09□□□□□ -0.63
FGFR1-209ENST00000397113 NOP53Q9NZM5 478 aaKnown RBP11.09□□□□□ -0.63
FGFR1-209ENST00000397113 POTEFA5A3E0 1075 aa11.08□□□□□ -0.63
FGFR1-209ENST00000397113 STXBP3O00186 592 aa11.08□□□□□ -0.63
FGFR1-209ENST00000397113 RASGRF2O14827 1237 aa11.08□□□□□ -0.63
FGFR1-209ENST00000397113 AP1G2O75843 785 aa11.08□□□□□ -0.63
FGFR1-209ENST00000397113 POTEIP0CG38 1075 aa11.08□□□□□ -0.63
FGFR1-209ENST00000397113 STX2P32856 288 aa11.08□□□□□ -0.63
FGFR1-209ENST00000397113 CCDC6Q16204 474 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms