RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 XRCC4Q13426 336 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 SBK1Q52WX2 424 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 GLE1Q53GS7 698 aaKnown RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 ZNF658Q5TYW1 1059 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 DDX42Q86XP3 938 aaKnown RBP eCLIP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 MDM1Q8TC05 714 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 TLR10Q9BXR5 811 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 EPB41L4AQ9HCS5 686 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 GDF3Q9NR23 364 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 GINM1Q9NU53 330 aa12.88□□□□□ -0.35
FGFR1-208ENST00000397108 NOVA2Q9UNW9 492 aaKnown RBP12.88□□□□□ -0.35
FGFR1-208ENST00000397108 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 TESPA1A2RU30 521 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-208ENST00000397108 KLHL33A6NCF5 533 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 AKR1B10O60218 316 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 EVX2Q03828 476 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 MAGEC3Q8TD91 643 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 TUBGCP2Q9BSJ2 902 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 BEGAINQ9BUH8 593 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 KCNH4Q9UQ05 1017 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 TRPC6Q9Y210 931 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 FTCDO95954 541 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 EIF4A3P38919 411 aaKnown RBP12.87□□□□□ -0.35
FGFR1-208ENST00000397108 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-208ENST00000397108 PTPROQ16827 1216 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
FGFR1-208ENST00000397108 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 CCDC170Q8IYT3 715 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 EXOC1Q9NV70 894 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 SAGE1Q9NXZ1 904 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 DEXIO95424 95 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 SHMT1P34896 483 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 SLC8A3P57103 927 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 ZBED6P86452 979 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 NBPF20Q3BBV1 942 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 FAM133BQ5BKY9 247 aaKnown RBP12.87□□□□□ -0.35
FGFR1-208ENST00000397108 GKAP1Q5VSY0 366 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-208ENST00000397108 ARMC3Q5W041 872 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 ZNF662Q6ZS27 426 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 FAM167BQ9BTA0 163 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 LRRC4CQ9HCJ2 640 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 FAM207AQ9NSI2 230 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-208ENST00000397108 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 GGT7Q9UJ14 662 aa12.87□□□□□ -0.35
FGFR1-208ENST00000397108 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 A0A1W2PQC6 194 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 EPHB6O15197 1021 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 DIAPH2O60879 1101 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 ASNSP08243 561 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 HSD17B3P37058 310 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 DNM2P50570 870 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 KIF11P52732 1056 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 CFAP221Q4G0U5 840 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 MAB21L3Q8N8X9 362 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 CCT6BQ92526 530 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 TATDN2Q93075 761 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 SPAG5Q96R06 1193 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 SH3GL3Q99963 347 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 TTYH3Q9C0H2 523 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 PANK4Q9NVE7 773 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 SLC12A6Q9UHW9 1150 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 ZHX2Q9Y6X8 837 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 LOC285556D6RIA3 1793 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 STK36Q9NRP7 1315 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
FGFR1-208ENST00000397108 KIF4AO95239 1232 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 CETPP11597 493 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 MCM7P33993 719 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 CTNNA1P35221 906 aaKnown RBP12.86□□□□□ -0.35
FGFR1-208ENST00000397108 MAGEA1P43355 309 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 ITIH3Q06033 890 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 ZNF572Q7Z3I7 529 aaPredicted RBP12.86□□□□□ -0.35
FGFR1-208ENST00000397108 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 UBLCP1Q8WVY7 318 aaPredicted RBP12.86□□□□□ -0.35
FGFR1-208ENST00000397108 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
FGFR1-208ENST00000397108 CXCL11O14625 94 aa12.85□□□□□ -0.35
FGFR1-208ENST00000397108 RAD51CO43502 376 aa12.85□□□□□ -0.35
FGFR1-208ENST00000397108 MTIF2P46199 727 aaKnown RBP12.85□□□□□ -0.35
FGFR1-208ENST00000397108 MAGOHP61326 146 aaKnown RBP12.85□□□□□ -0.35
FGFR1-208ENST00000397108 JAG1P78504 1218 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms