RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 OTUD6AQ7L8S5 288 aa23.43■■□□□ 1.34
SEC13-207ENST00000397105 METTL13Q8N6R0 699 aa23.43■■□□□ 1.34
SEC13-207ENST00000397105 SPRYD3Q8NCJ5 442 aa23.43■■□□□ 1.34
SEC13-207ENST00000397105 VWCEQ96DN2 955 aa23.43■■□□□ 1.34
SEC13-207ENST00000397105 RNPC3Q96LT9 517 aaKnown RBP23.43■■□□□ 1.34
SEC13-207ENST00000397105 RAB34Q9BZG1 259 aa23.43■■□□□ 1.34
SEC13-207ENST00000397105 TRIOBPQ9H2D6 2365 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 CXCL10P02778 98 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 ACTN1P12814 892 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 TMOD1P28289 359 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 RESTQ13127 1097 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 BECN1Q14457 450 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 GPNMBQ14956 572 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 MTERF2Q49AM1 385 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 KIAA0319LQ8IZA0 1049 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 HERVK_113Q902F9 699 aa23.42■■□□□ 1.34
SEC13-207ENST00000397105 MTIF3Q9H2K0 278 aaKnown RBP23.42■■□□□ 1.34
SEC13-207ENST00000397105 ZSCAN16Q9H4T2 348 aaPredicted RBP23.42■■□□□ 1.34
SEC13-207ENST00000397105 WRAP73Q9P2S5 460 aaPredicted RBP23.42■■□□□ 1.34
SEC13-207ENST00000397105 M0QZ92 97 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 BMP15O95972 392 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 CHRNA1P02708 482 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 YWHABP31946 246 aaKnown RBP23.41■■□□□ 1.34
SEC13-207ENST00000397105 MRPS6P82932 125 aaKnown RBP23.41■■□□□ 1.34
SEC13-207ENST00000397105 ATP2C1P98194 919 aaPredicted RBP23.41■■□□□ 1.34
SEC13-207ENST00000397105 TBC1D8BQ0IIM8 1120 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 MBTPS1Q14703 1052 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 OTOP2Q7RTS6 562 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 LRWD1Q9UFC0 647 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 PPME1Q9Y570 386 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 STK24Q9Y6E0 443 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 LAMA2P24043 3122 aaKnown RBP23.41■■□□□ 1.34
SEC13-207ENST00000397105 LAMA3Q16787 3333 aa23.41■■□□□ 1.34
SEC13-207ENST00000397105 KAT6AQ92794 2004 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 TRIP12Q14669 1992 aaPredicted RBP23.4■■□□□ 1.34
SEC13-207ENST00000397105 TMEM150BA6NC51 233 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 LYPLA2O95372 231 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 LRIT3Q3SXY7 679 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 EFCAB12Q6NXP0 572 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 CEP170P1Q96L14 293 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 POLR3CQ9BUI4 534 aaPredicted RBP23.4■■□□□ 1.34
SEC13-207ENST00000397105 SUGCTQ9HAC7 445 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 TUFT1Q9NNX1 390 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 CYP26B1Q9NR63 512 aa23.4■■□□□ 1.34
SEC13-207ENST00000397105 MGAT3Q09327 533 aa23.39■■□□□ 1.33
SEC13-207ENST00000397105 TMEM62Q0P6H9 643 aa23.39■■□□□ 1.33
SEC13-207ENST00000397105 ARL6IP4Q66PJ3 421 aaKnown RBP23.39■■□□□ 1.33
SEC13-207ENST00000397105 HAUS3Q68CZ6 603 aa23.39■■□□□ 1.33
SEC13-207ENST00000397105 PLA2G4FQ68DD2 849 aa23.39■■□□□ 1.33
SEC13-207ENST00000397105 EXOC8Q8IYI6 725 aa23.39■■□□□ 1.33
SEC13-207ENST00000397105 JPH2Q9BR39 696 aaPredicted RBP23.39■■□□□ 1.33
SEC13-207ENST00000397105 SH2D3AQ9BRG2 576 aa23.39■■□□□ 1.33
SEC13-207ENST00000397105 CDY2AQ9Y6F7 541 aa23.39■■□□□ 1.33
SEC13-207ENST00000397105 MYH9P35579 1960 aaKnown RBP23.38■■□□□ 1.33
SEC13-207ENST00000397105 MAFO75444 373 aaPredicted RBP23.38■■□□□ 1.33
SEC13-207ENST00000397105 SPATA31C1P0DKV0 1188 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 XRCC6P12956 609 aaKnown RBP eCLIP23.38■■□□□ 1.33
SEC13-207ENST00000397105 RPA1P27694 616 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 NPEPPSP55786 919 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 IL17AQ16552 155 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 RASIP1Q5U651 963 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 CNKSR3Q6P9H4 555 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 CATSPER3Q86XQ3 398 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 ZNF710Q8N1W2 664 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 IGSF22Q8N9C0 903 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 CEP89Q96ST8 783 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 MAP7D2Q96T17 732 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 CELF4Q9BZC1 486 aaKnown RBP23.38■■□□□ 1.33
SEC13-207ENST00000397105 ANKEF1Q9NU02 776 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 TRPV2Q9Y5S1 764 aa23.38■■□□□ 1.33
SEC13-207ENST00000397105 BAIAP3O94812 1187 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 DNM2P50570 870 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 SF3A1Q15459 793 aaKnown RBP23.37■■□□□ 1.33
SEC13-207ENST00000397105 PLEKHG4Q58EX7 1191 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 XKR9Q5GH70 373 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 LRRC71Q8N4P6 559 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 SLC7A3Q8WY07 619 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 SEPT8Q92599 483 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 NACC1Q96RE7 527 aa23.37■■□□□ 1.33
SEC13-207ENST00000397105 IGKV6-21A0A0C4DH24 114 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 ZBBXA8MT70 800 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 ZBTB39O15060 712 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 MED24O75448 989 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 MUTP22033 750 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 RFC5P40937 340 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 CLCN3P51790 818 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 IKBKEQ14164 716 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 KRT79Q5XKE5 535 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 LINC01465Q8N7H1 131 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 USP38Q8NB14 1042 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 CCDC43Q96MW1 224 aaKnown RBP23.36■■□□□ 1.33
SEC13-207ENST00000397105 CXXC1Q9P0U4 656 aaPredicted RBP23.36■■□□□ 1.33
SEC13-207ENST00000397105 AKT3Q9Y243 479 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 SLC4A7Q9Y6M7 1214 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 SQORQ9Y6N5 450 aa23.36■■□□□ 1.33
SEC13-207ENST00000397105 KDM3AQ9Y4C1 1321 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 ABHD14A-ACY1A0A1B0GW23 586 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 VWA3AA6NCI4 1184 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 ZSCAN22P10073 491 aaPredicted RBP23.35■■□□□ 1.33
SEC13-207ENST00000397105 GHRP10912 638 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms