RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 PLA2G4BP0C869 781 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 OAS2P29728 719 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 CYP27A1Q02318 531 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 ZNF699Q32M78 642 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 TAS2R42Q7RTR8 314 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 RMDN1Q96DB5 314 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 NRBF2Q96F24 287 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 USP44Q9H0E7 712 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 RAVER2Q9HCJ3 691 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 GINM1Q9NU53 330 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.7□□□□□ -1.184e-8■■■■□ 23.5
UPF2-203ENST00000397053 AIPL1Q9NZN9 384 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 THEGQ9P2T0 379 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 TJP2Q9UDY2 1190 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 EXOC1LA0A1B0GW35 172 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 HSPA4LO95757 839 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 SDC4P31431 198 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 GTF2H3Q13889 308 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 ZNF235Q14590 738 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 UBE2SQ16763 222 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 C10orf76Q5T2E6 689 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 APOA5Q6Q788 366 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 DNMBPQ6XZF7 1577 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 DYNLL2Q96FJ2 89 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 DDX50Q9BQ39 737 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 ASPSCR1Q9BZE9 553 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 ANLNQ9NQW6 1124 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 RGL1Q9NZL6 768 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 C6orf203Q9P0P8 240 aaPredicted RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 RPRD2Q5VT52 1461 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 ZC3H4Q9UPT8 1303 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 GOLGA8KD6RF30 607 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 PGRMC1O00264 195 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 KRT37O76014 449 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 SERPIND1P05546 499 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 DDX5P17844 614 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 EIF2B5Q13144 721 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 BCAS4Q8TDM0 211 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 FOPNLQ96NB1 174 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 MMP19Q99542 508 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 ADAM22Q9P0K1 906 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 PCDHA5Q9Y5H7 936 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 C6orf222P0C671 652 aaPredicted RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 APBA1Q02410 837 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 TRIP13Q15645 432 aaPredicted RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 PODNQ7Z5L7 613 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 TMCO5AQ8N6Q1 288 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 IL17REQ8NFR9 667 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 SSH3Q8TE77 659 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 SERPINI1Q99574 410 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 KIAA1586Q9HCI6 787 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 COPRSQ9NQ92 184 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 SELENONQ9NZV5 590 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 ATP8A1Q9Y2Q0 1164 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 ATP10DQ9P241 1426 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 PNMA6FA0A0J9YX94 578 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 UBA6A0AVT1 1052 aaPredicted RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 IPO5O00410 1097 aaKnown RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 PRPF4O43172 522 aaKnown RBP eCLIP7.7□□□□□ -1.18
UPF2-203ENST00000397053 COPB2P35606 906 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 ZNF157P51786 506 aaPredicted RBP7.7□□□□□ -1.18
UPF2-203ENST00000397053 CENPUQ71F23 418 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 RHPN2Q8IUC4 686 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 OR9Q1Q8NGQ5 310 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 FAF2Q96CS3 445 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 C2orf40Q9H1Z8 148 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 TRPC7Q9HCX4 862 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 TBK1Q9UHD2 729 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 HEY1Q9Y5J3 304 aa7.7□□□□□ -1.18
UPF2-203ENST00000397053 GPATCH8Q9UKJ3 1502 aaKnown RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 CCDC151A5D8V7 595 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 ASB14A6NK59 587 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 RSPH10B2B2RC85 870 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 UBXN8O00124 270 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 RSPH10BP0C881 870 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 KRT76Q01546 638 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 MECOMQ03112 1051 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 POU5F1BQ06416 359 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 FAM133AQ8N9E0 248 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 TTC8Q8TAM2 541 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 ZNF668Q96K58 619 aaPredicted RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 FOXP1Q9H334 677 aaPredicted RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 TBC1D22BQ9NU19 505 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CACNA2D2Q9NY47 1150 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 L3MBTL1Q9Y468 752 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CFAP69A5D8W1 941 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CDK8P49336 464 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 SNAP25P60880 206 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CACNB2Q08289 660 aaPredicted RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 FAM83BQ5T0W9 1011 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 E4F1Q66K89 784 aaPredicted RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 ARMC6Q6NXE6 501 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 BTN2A2Q8WVV5 523 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 STX18Q9P2W9 335 aaKnown RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 PCDHA7Q9UN72 937 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CAPN7Q9Y6W3 813 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 PARD3Q8TEW0 1356 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 ABCC12Q96J65 1359 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 ABCC10Q5T3U5 1492 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms