RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 RPA1P27694 616 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 COPB2P35606 906 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 SEC24CP53992 1094 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 COG2Q14746 738 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 IFI16Q16666 785 aaKnown RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 ZNF572Q7Z3I7 529 aaPredicted RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 PPM1EQ8WY54 764 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 CAVIN3Q969G5 261 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 CELF4Q9BZC1 486 aaKnown RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 GLT8D2Q9H1C3 349 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 PI4KBQ9UBF8 816 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 NR1D1P20393 614 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 CTNNA1P35221 906 aaKnown RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 RNF187Q5TA31 235 aaPredicted RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 PACS2Q86VP3 889 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 SEPT12Q8IYM1 358 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 SYCP3Q8IZU3 236 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 METTL13Q8N6R0 699 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 SYT2Q8N9I0 419 aaPredicted RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 CRAMP1Q96RY5 1269 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 TDRD3Q9H7E2 651 aaKnown RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 OSGEPQ9NPF4 335 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 GDF3Q9NR23 364 aa17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 NOC2LQ9Y3T9 749 aaKnown RBP17.35■□□□□ 0.37
ATP2A3-206ENST00000397043 HOXD13P35453 343 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 ERVK-9P63128 1117 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 HYIQ5T013 277 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 FAM186BQ8IYM0 893 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 PLIN4Q96Q06 1357 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 TMEM110-MUSTN1A8MSY1 372 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 PGRMC1O00264 195 aaKnown RBP17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 POLRMTO00411 1230 aaKnown RBP17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 BACH1O14867 736 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 KIAA0754O94854 1291 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 POLD1P28340 1107 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 STAT1P42224 750 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 FRMD5Q7Z6J6 570 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 DAPK3O43293 454 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 SYDE2Q5VT97 1194 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 SH2D3AQ9BRG2 576 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 CHORDC1Q9UHD1 332 aaPredicted RBP17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 ZBTB21Q9ULJ3 1066 aa17.34■□□□□ 0.37
ATP2A3-206ENST00000397043 ADRA2BP18089 450 aa17.33■□□□□ 0.37
ATP2A3-206ENST00000397043 LLGL1Q15334 1064 aa17.33■□□□□ 0.37
ATP2A3-206ENST00000397043 DYDC2Q96IM9 177 aa17.33■□□□□ 0.37
ATP2A3-206ENST00000397043 SH3GL2Q99962 352 aa17.33■□□□□ 0.37
ATP2A3-206ENST00000397043 TAF1DQ9H5J8 278 aaPredicted RBP17.33■□□□□ 0.37
ATP2A3-206ENST00000397043 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.37
ATP2A3-206ENST00000397043 PITPNM2Q9BZ72 1349 aa17.33■□□□□ 0.36
ATP2A3-206ENST00000397043 E7EVH7 732 aa17.33■□□□□ 0.36
ATP2A3-206ENST00000397043 BMP3P12645 472 aa17.33■□□□□ 0.36
ATP2A3-206ENST00000397043 AP3B2Q13367 1082 aa17.33■□□□□ 0.36
ATP2A3-206ENST00000397043 ZNF211Q13398 564 aaPredicted RBP17.33■□□□□ 0.36
ATP2A3-206ENST00000397043 LRCH2Q5VUJ6 765 aa17.33■□□□□ 0.36
ATP2A3-206ENST00000397043 SLC35C1Q96A29 364 aa17.33■□□□□ 0.36
ATP2A3-206ENST00000397043 SMIM23A6NLE4 172 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 PDXKO00764 312 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 TTI1O43156 1089 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 EVI5O60447 810 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 SHOX2O60902 331 aaPredicted RBP17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 ERLIN2O94905 339 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 SPIRE1Q08AE8 756 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 IQCKQ8N0W5 287 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 TPCN2Q8NHX9 752 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 DCAF4Q8WV16 495 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 BZW2Q9Y6E2 419 aaKnown RBP17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 GRIN2DO15399 1336 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 GCOM1H8Y6P7 765 aaPredicted RBP17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 FGGP02679 453 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 MYZAPP0CAP1 466 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 GALCP54803 685 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 HS2ST1Q7LGA3 356 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 FAM178BQ8IXR5 827 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 GJD4Q96KN9 370 aaPredicted RBP17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 TRAF3IP3Q9Y228 551 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 ASTN1O14525 1302 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 INPP5BP32019 993 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 MARSP56192 900 aaKnown RBP17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 IFFO1Q0D2I5 559 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 ODR4Q5SWX8 454 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 EFCAB13Q8IY85 973 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 WHAMMQ8TF30 809 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 PCIF1Q9H4Z3 704 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 METTL14Q9HCE5 456 aaKnown RBP17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 BTAF1O14981 1849 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 SBF2Q86WG5 1849 aa17.32■□□□□ 0.36
ATP2A3-206ENST00000397043 DDX3XO00571 662 aaKnown RBP eCLIP17.31■□□□□ 0.361e-8■■□□□ 12.6
ATP2A3-206ENST00000397043 DRAP1Q14919 205 aaPredicted RBP17.31■□□□□ 0.36
ATP2A3-206ENST00000397043 EPHA7Q15375 998 aa17.31■□□□□ 0.36
ATP2A3-206ENST00000397043 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
ATP2A3-206ENST00000397043 RINT1Q6NUQ1 792 aa17.31■□□□□ 0.36
ATP2A3-206ENST00000397043 CTNNBL1Q8WYA6 563 aaPredicted RBP17.31■□□□□ 0.36
ATP2A3-206ENST00000397043 RUBCNQ92622 972 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms