RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 VPS33BQ9H267 617 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 NEUROG2Q9H2A3 272 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 SLITRK6Q9H5Y7 841 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 POLD4Q9HCU8 107 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 BMP2KQ9NSY1 1161 aaPredicted RBP14.55□□□□□ -0.08
TRIM40-207ENST00000396581 USP40Q9NVE5 1235 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 NAGPAQ9UK23 515 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 PITPNM2Q9BZ72 1349 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 YDJCA8MPS7 323 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 E7EVH7 732 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 H0YHG0 523 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 PGRMC1O00264 195 aaKnown RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 POLD1P28340 1107 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 DNA2P51530 1060 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 SPDYCQ5MJ68 293 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 ARMC9Q7Z3E5 817 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 KIAA0825Q8IV33 1275 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 TPCN2Q8NHX9 752 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 COA7Q96BR5 231 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 PIM2Q9P1W9 311 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 SUCLA2Q9P2R7 463 aaPredicted RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 INTUQ9ULD6 942 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 NPEPPSP55786 919 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 RNASE9P60153 205 aaKnown RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 ADAM9Q13443 819 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 HLTFQ14527 1009 aaKnown RBP eCLIP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 FRMD5Q7Z6J6 570 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 METTL13Q8N6R0 699 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 DDX4Q9NQI0 724 aaKnown RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 EMILIN3Q9NT22 766 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 DDX20Q9UHI6 824 aaKnown RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 DDX25Q9UHL0 483 aaKnown RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 SERPINA10Q9UK55 444 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 TTC7AQ9ULT0 858 aaPredicted RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 TRAF3IP3Q9Y228 551 aa14.54□□□□□ -0.08
TRIM40-207ENST00000396581 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
TRIM40-207ENST00000396581 CHUKO15111 745 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 CETN3O15182 167 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 UCHL3P15374 230 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 CYP11B2P19099 503 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 CTNNA1P35221 906 aaKnown RBP14.53□□□□□ -0.08
TRIM40-207ENST00000396581 SETQ01105 290 aaPredicted RBP14.53□□□□□ -0.08
TRIM40-207ENST00000396581 POU5F1Q01860 360 aaKnown RBP14.53□□□□□ -0.08
TRIM40-207ENST00000396581 GABPAQ06546 454 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 IFT88Q13099 833 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 TAX1BP1Q86VP1 789 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 SWAP70Q9UH65 585 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 NOC2LQ9Y3T9 749 aaKnown RBP14.53□□□□□ -0.08
TRIM40-207ENST00000396581 FOCADQ5VW36 1801 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 IGKV6D-41A0A0C4DH26 115 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 CEP104O60308 925 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 PLA2G4BP0C869 781 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 PPP2R2AP63151 447 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 ARID5AQ03989 594 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 LACTB2Q53H82 288 aaPredicted RBP14.53□□□□□ -0.08
TRIM40-207ENST00000396581 ALKBH5Q6P6C2 394 aaKnown RBP14.53□□□□□ -0.08
TRIM40-207ENST00000396581 TMC3Q7Z5M5 1100 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 NELFCDQ8IXH7 590 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 NAP1L4Q99733 375 aaKnown RBP14.53□□□□□ -0.08
TRIM40-207ENST00000396581 TXLNGYQ9BZA5 131 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 KLC4Q9NSK0 619 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 MTMR4Q9NYA4 1195 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 PCDHA12Q9UN75 941 aa14.53□□□□□ -0.08
TRIM40-207ENST00000396581 PNMA6FA0A0J9YX94 578 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 E9PMD0 336 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 HPDP32754 393 aaPredicted RBP14.52□□□□□ -0.09
TRIM40-207ENST00000396581 JAM2P57087 298 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 PICALMQ13492 652 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 DDX42Q86XP3 938 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRIM40-207ENST00000396581 OR2W6PQ8NHA6 318 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 RBM46Q8TBY0 533 aaKnown RBP14.52□□□□□ -0.09
TRIM40-207ENST00000396581 LMBR1Q8WVP7 490 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 P3H4Q92791 437 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 OSBPL7Q9BZF2 842 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 KANSL2Q9H9L4 492 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 PPANQ9NQ55 473 aaKnown RBP14.52□□□□□ -0.09
TRIM40-207ENST00000396581 HDAC9Q9UKV0 1011 aa14.52□□□□□ -0.09
TRIM40-207ENST00000396581 ZNF646O15015 1829 aaPredicted RBP14.52□□□□□ -0.09
TRIM40-207ENST00000396581 FRMPD2Q68DX3 1309 aaPredicted RBP14.52□□□□□ -0.09
TRIM40-207ENST00000396581 PPP1R11O60927 126 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 FLOT1O75955 427 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 ACTN1P12814 892 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 SLC9A1P19634 815 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 PON1P27169 355 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 FLT3P36888 993 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 TNNI2P48788 182 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 SLC12A3P55017 1021 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 BYSLQ13895 437 aaKnown RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 HERC4Q5GLZ8 1057 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 RNF187Q5TA31 235 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 NT5DC3Q86UY8 548 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 TLCD1Q96CP7 247 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 HES6Q96HZ4 224 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 CNOT8Q9UFF9 292 aaKnown RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 MYH4Q9Y623 1939 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 GFPT2O94808 682 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms