RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 KSR1Q8IVT5 923 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 TLR10Q9BXR5 811 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 SIX2Q9NPC8 291 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 AJAP1Q9UKB5 411 aaPredicted RBP18.17■□□□□ 0.5
TRIM39-205ENST00000396551 LOXHD1Q8IVV2 1947 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 UCHL3P15374 230 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 CASP8Q14790 479 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 EXOC3L4Q17RC7 722 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 PSMB7Q99436 277 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 PACSIN1Q9BY11 444 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 PDE11AQ9HCR9 933 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 HYOU1Q9Y4L1 999 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 TARSL2A2RTX5 802 aaKnown RBP18.17■□□□□ 0.5
TRIM39-205ENST00000396551 PHF20L1A8MW92 1017 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 ASNSP08243 561 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 CXCR5P32302 372 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 RNF10Q8N5U6 811 aaKnown RBP18.17■□□□□ 0.5
TRIM39-205ENST00000396551 ZBTB9Q96C00 473 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 NOX5Q96PH1 765 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 MXRA8Q9BRK3 442 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF341Q9BYN7 854 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 PARVGQ9HBI0 331 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 SMARCAL1Q9NZC9 954 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 EHD2Q9NZN4 543 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 ADAMTS1Q9UHI8 967 aa18.17■□□□□ 0.5
TRIM39-205ENST00000396551 EPB41P11171 864 aaKnown RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 ITGB5P18084 799 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 RPL13P26373 211 aaKnown RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 KLRC1P26715 233 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF131P52739 623 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 SETQ01105 290 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 COG2Q14746 738 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 MSL3Q8N5Y2 521 aaKnown RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 RBM46Q8TBY0 533 aaKnown RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 TEKT3Q9BXF9 490 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 WDR11Q9BZH6 1224 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 METTL14Q9HCE5 456 aaKnown RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 CCPG1Q9ULG6 757 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 PCDHB13Q9Y5F0 798 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 LRRIQ3A6PVS8 624 aaPredicted RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 IPO5O00410 1097 aaKnown RBP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 NFIBO00712 420 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 ICAM1P05362 532 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 MUTP22033 750 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 TCERG1LQ5VWI1 586 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 IL31RAQ8NI17 732 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 NACC1Q96RE7 527 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRIM39-205ENST00000396551 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
TRIM39-205ENST00000396551 ZMYND10O75800 440 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 DGKZQ13574 1117 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 NAB2Q15742 525 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 TXLNBQ8N3L3 684 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 BANK1Q8NDB2 785 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 CLEC4DQ8WXI8 215 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 LXNQ9BS40 222 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 RPTORQ8N122 1335 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 TCP1P17987 556 aaKnown RBP18.15■□□□□ 0.5
TRIM39-205ENST00000396551 FAM193AP78312 1265 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 PTK2Q05397 1052 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF571Q7Z3V5 609 aaPredicted RBP18.15■□□□□ 0.5
TRIM39-205ENST00000396551 MMGT1Q8N4V1 131 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 DDX39AO00148 427 aaKnown RBP18.15■□□□□ 0.5
TRIM39-205ENST00000396551 ZNF720Q7Z2F6 126 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 MYOZ2Q9NPC6 264 aa18.15■□□□□ 0.5
TRIM39-205ENST00000396551 MYBL2P10244 700 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 NFIL3Q16649 462 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 HOOK2Q96ED9 719 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 N4BP1O75113 896 aaKnown RBP18.14■□□□□ 0.49
TRIM39-205ENST00000396551 ITIH3Q06033 890 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 MAPK7Q13164 816 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 RASA3Q14644 834 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 GJB7Q6PEY0 223 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 GBP6Q6ZN66 633 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 SPATA4Q8NEY3 305 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 PKD2L1Q9P0L9 805 aa18.14■□□□□ 0.49
TRIM39-205ENST00000396551 PALMO75781 387 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 EGFRP00533 1210 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 NAP1L1P55209 391 aaKnown RBP18.13■□□□□ 0.49
TRIM39-205ENST00000396551 JAM2P57087 298 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 DAW1Q8N136 415 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 TEPSINQ96N21 525 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 SPAG5Q96R06 1193 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 RIT2Q99578 217 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 GCNT4Q9P109 453 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 SEL1LQ9UBV2 794 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 GYS2P54840 703 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 KIAA0753Q2KHM9 967 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 IQCEQ6IPM2 695 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 GSPT2Q8IYD1 628 aaKnown RBP18.13■□□□□ 0.49
TRIM39-205ENST00000396551 FAM186BQ8IYM0 893 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 ODF2LQ9ULJ1 636 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 DHX15O43143 795 aaKnown RBP18.13■□□□□ 0.49
TRIM39-205ENST00000396551 FAM178BQ8IXR5 827 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 LUC7LQ9NQ29 371 aaKnown RBP18.13■□□□□ 0.49
TRIM39-205ENST00000396551 KCNH7Q9NS40 1196 aa18.13■□□□□ 0.49
TRIM39-205ENST00000396551 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.13■□□□□ 0.49
TRIM39-205ENST00000396551 PSMC2P35998 433 aaKnown RBP18.12■□□□□ 0.49
TRIM39-205ENST00000396551 HDAC7Q8WUI4 952 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms