RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TIPINQ9BVW5 301 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 FLRT1Q9NZU1 646 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 LIMA1Q9UHB6 759 aaKnown RBP14.1□□□□□ -0.15
TRIM39-204ENST00000396548 IRF5Q13568 498 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 ZNF507Q8TCN5 953 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 SCFD2Q8WU76 684 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 COPS5Q92905 334 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 NIFKQ9BYG3 293 aaKnown RBP14.1□□□□□ -0.15
TRIM39-204ENST00000396548 THAP9Q9H5L6 903 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 POLD4Q9HCU8 107 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 IFNKQ9P0W0 207 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 DKC1O60832 514 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRIM39-204ENST00000396548 HIP1RO75146 1068 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 PPP1R37O75864 691 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 KRT18P05783 430 aaKnown RBP14.09□□□□□ -0.15
TRIM39-204ENST00000396548 NPEPPSP55786 919 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 PRKCEQ02156 737 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 UTP14CQ5TAP6 766 aaKnown RBP14.09□□□□□ -0.15
TRIM39-204ENST00000396548 DPP9Q86TI2 863 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 MYOCDQ8IZQ8 938 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 SEPT1Q8WYJ6 367 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 ZNF302Q9NR11 478 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 TBC1D7Q9P0N9 293 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 A0A1B0GTH6 734 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 BICDL2A1A5D9 508 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 AOC2O75106 756 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 PTGS1P23219 599 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 CFHR5Q9BXR6 569 aa14.09□□□□□ -0.15
TRIM39-204ENST00000396548 SFI1A8K8P3 1242 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 MYBP10242 640 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 TXNP10599 105 aaKnown RBP14.08□□□□□ -0.15
TRIM39-204ENST00000396548 SP4Q02446 784 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 NOGQ13253 232 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 TTLL4Q14679 1199 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 NR1I3Q14994 352 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 TARBP2Q15633 366 aaKnown RBP14.08□□□□□ -0.15
TRIM39-204ENST00000396548 SH2D3AQ9BRG2 576 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 PARVGQ9HBI0 331 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 ZMYM2Q9UBW7 1377 aa14.08□□□□□ -0.15
TRIM39-204ENST00000396548 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 TCF7P36402 384 aaPredicted RBP14.08□□□□□ -0.16
TRIM39-204ENST00000396548 APLP1P51693 650 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 LRRC63Q05C16 580 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 XKR3Q5GH77 459 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 TCP11X2Q5H9J9 407 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 OLFML2BQ68BL8 750 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 LRRC55Q6ZSA7 311 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 ZNF720Q7Z2F6 126 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.08□□□□□ -0.16
TRIM39-204ENST00000396548 EIF3DO15371 548 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRIM39-204ENST00000396548 ADCY6O43306 1168 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 OATP04181 439 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 MAPTP10636 758 aaKnown RBP14.08□□□□□ -0.16
TRIM39-204ENST00000396548 DEFB115Q30KQ5 88 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 HS1BP3Q53T59 392 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 HSP90AA4PQ58FG1 418 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 OTUD6AQ7L8S5 288 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
TRIM39-204ENST00000396548 NOC3LQ8WTT2 800 aaKnown RBP14.08□□□□□ -0.16
TRIM39-204ENST00000396548 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
TRIM39-204ENST00000396548 TBCAO75347 108 aaKnown RBP14.07□□□□□ -0.16
TRIM39-204ENST00000396548 HOXD8P13378 290 aaPredicted RBP14.07□□□□□ -0.16
TRIM39-204ENST00000396548 XKR9Q5GH70 373 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 PLPPR4Q7Z2D5 763 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 CAPNS2Q96L46 248 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 XPNPEP1Q9NQW7 623 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 ALDH1A1P00352 501 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 PBX1P40424 430 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 CAP1Q01518 475 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 ACVR2BQ13705 512 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 SRRTQ9BXP5 876 aaKnown RBP14.07□□□□□ -0.16
TRIM39-204ENST00000396548 ABHD16BQ9H3Z7 469 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 ST6GALNAC4Q9H4F1 302 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 TRAF3IP3Q9Y228 551 aa14.07□□□□□ -0.16
TRIM39-204ENST00000396548 CASP8AP2Q9UKL3 1982 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 ZBTB42B2RXF5 422 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 FAM13AO94988 1023 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 ADCYAP1R1P41586 468 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 UBASH3AP57075 661 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 KRT31Q15323 416 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 DHX37Q8IY37 1157 aaKnown RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 MYCT1Q8N699 235 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 SPATA33Q96N06 139 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 KCNJ18B7U540 433 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 NKRFO15226 690 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 USO1O60763 962 aaKnown RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 ZNF865P0CJ78 1059 aaPredicted RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 PLS3P13797 630 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 SMPD1P17405 629 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 STAT5BP51692 787 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 CCDC144BQ3MJ40 725 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 KCNN1Q92952 543 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 SLC5A4Q9NY91 659 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms