RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 DONSONQ9NYP3 566 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 ESYT3A0FGR9 886 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
TUBB-208ENST00000396389 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 NKRFO15226 690 aaKnown RBP eCLIP11.3□□□□□ -0.6
TUBB-208ENST00000396389 ICAM1P05362 532 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 ZBTB48P10074 688 aaPredicted RBP11.3□□□□□ -0.6
TUBB-208ENST00000396389 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
TUBB-208ENST00000396389 OSBPP22059 807 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 NT5C2P49902 561 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 FSTL1Q12841 308 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 TRIML1Q8N9V2 468 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 NID2Q14112 1375 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 GREB1LQ9C091 1923 aaPredicted RBP11.3□□□□□ -0.6
TUBB-208ENST00000396389 MEIS2O14770 477 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 CCNT1O60563 726 aaKnown RBP11.29□□□□□ -0.6
TUBB-208ENST00000396389 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 CTAGE1Q96RT6 745 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 TEX13BQ9BXU2 312 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 ATP2C2O75185 946 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 TDP2O95551 362 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 TUBBP07437 444 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 PLEKP08567 350 aaPredicted RBP11.29□□□□□ -0.6
TUBB-208ENST00000396389 PMS1P54277 932 aaKnown RBP11.29□□□□□ -0.6
TUBB-208ENST00000396389 TUBB4BP68371 445 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 IFT88Q13099 833 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 AENQ8WTP8 325 aaKnown RBP11.29□□□□□ -0.6
TUBB-208ENST00000396389 NELFBQ8WX92 580 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 CABS1Q96KC9 395 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
TUBB-208ENST00000396389 MTRQ99707 1265 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 SH3GL2Q99962 352 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 ARHGAP39Q9C0H5 1083 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 SPDYE3A6NKU9 549 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 NCK2O43639 380 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 SP4Q02446 784 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 PAPD7Q5XG87 772 aaKnown RBP11.29□□□□□ -0.6
TUBB-208ENST00000396389 LBX2Q6XYB7 198 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 CEP57Q86XR8 500 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 IL31RAQ8NI17 732 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 MTMR8Q96EF0 704 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 TAAR1Q96RJ0 339 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 PLIN2Q99541 437 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 MYO1AQ9UBC5 1043 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
TUBB-208ENST00000396389 ABCB11O95342 1321 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 KIAA0754O94854 1291 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 FAM153BP0C7A2 387 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 FECHP22830 423 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 GNA11P29992 359 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 RNASE9P60153 205 aaKnown RBP11.28□□□□□ -0.6
TUBB-208ENST00000396389 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 TRADDQ15628 312 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 SPRED3Q2MJR0 410 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 FAM153CQ494X1 144 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 RILPL1Q5EBL4 403 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 RNF207Q6ZRF8 634 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 OR8K1Q8NGG5 319 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 CLEC4DQ8WXI8 215 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 CCDC51Q96ER9 411 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 SGSM3Q96HU1 749 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 HAUS4Q9H6D7 363 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 A1CFQ9NQ94 594 aaKnown RBP11.28□□□□□ -0.6
TUBB-208ENST00000396389 FAM153AQ9UHL3 310 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 LUC7L2Q9Y383 392 aaKnown RBP11.28□□□□□ -0.6
TUBB-208ENST00000396389 GCOM1H8Y6P7 765 aaPredicted RBP11.28□□□□□ -0.6
TUBB-208ENST00000396389 CNMDO75829 334 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 POLR2MP0CAP2 368 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 HOXA7P31268 230 aaPredicted RBP11.28□□□□□ -0.6
TUBB-208ENST00000396389 MRPL12P52815 198 aaKnown RBP11.28□□□□□ -0.6
TUBB-208ENST00000396389 NNTQ13423 1086 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 NFRKBQ6P4R8 1299 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 REPS2Q8NFH8 660 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 GIMAP7Q8NHV1 300 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 ZIM3Q96PE6 472 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
TUBB-208ENST00000396389 MEFVO15553 781 aaPredicted RBP11.27□□□□□ -0.6
TUBB-208ENST00000396389 GUCY2FP51841 1108 aa11.27□□□□□ -0.6
TUBB-208ENST00000396389 KANK3Q6NY19 840 aa11.27□□□□□ -0.6
TUBB-208ENST00000396389 IFT81Q8WYA0 676 aa11.27□□□□□ -0.6
TUBB-208ENST00000396389 N4BP2L2Q92802 583 aaPredicted RBP11.27□□□□□ -0.6
TUBB-208ENST00000396389 MS4A14Q96JA4 679 aa11.27□□□□□ -0.6
TUBB-208ENST00000396389 LIMA1Q9UHB6 759 aaKnown RBP11.27□□□□□ -0.6
TUBB-208ENST00000396389 DDX39AO00148 427 aaKnown RBP11.27□□□□□ -0.61
TUBB-208ENST00000396389 ZNF76P36508 570 aa11.27□□□□□ -0.61
TUBB-208ENST00000396389 PRCPP42785 496 aa11.27□□□□□ -0.61
TUBB-208ENST00000396389 PABPC4Q13310 644 aaKnown RBP eCLIP11.27□□□□□ -0.611e-30■□□□□ 10.2
TUBB-208ENST00000396389 E2F5Q15329 346 aa11.27□□□□□ -0.61
TUBB-208ENST00000396389 POTEDQ86YR6 584 aa11.27□□□□□ -0.61
TUBB-208ENST00000396389 CREG2Q8IUH2 290 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms