RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 AK8Q96MA6 479 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 EMILIN3Q9NT22 766 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 AMACRQ9UHK6 382 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 PSME4Q14997 1843 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 RAD51CO43502 376 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 PPFIA4O75335 1185 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 RAD17O75943 681 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 PTGER2P43116 358 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 FKBP3Q00688 224 aaKnown RBP10.17□□□□□ -0.78
NDE1-201ENST00000396354 ICA1Q05084 483 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 PTK2Q05397 1052 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 TUBB2AQ13885 445 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 ASIC2Q16515 512 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 TMEM119Q4V9L6 283 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 PDXDC1Q6P996 788 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 TUBB2BQ9BVA1 445 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 CAPN7Q9Y6W3 813 aa10.17□□□□□ -0.78
NDE1-201ENST00000396354 TCP10L2B9ZVM9 353 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 F5H6K3 240 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 MYBP10242 640 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 MCM3P25205 808 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 KLRC3Q07444 240 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 ADCY1Q08828 1119 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 CTTNQ14247 550 aaKnown RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 ZC2HC1CQ53FD0 456 aaPredicted RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 CHADLQ6NUI6 762 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 SFR1Q86XK3 245 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 CRYGNQ8WXF5 182 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 MKL1Q969V6 931 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 RNPC3Q96LT9 517 aaKnown RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 TSGA10Q9BZW7 698 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 PI4KBQ9UBF8 816 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 MYO1FO00160 1098 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 BUB1BO60566 1050 aaPredicted RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 GTF2A1P52655 376 aaPredicted RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 LRRC55Q6ZSA7 311 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 DAAM2Q86T65 1068 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 TPH2Q8IWU9 490 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 BAP1Q92560 729 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 CUL5Q93034 780 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 LENG9Q96B70 501 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 DNAJC19Q96DA6 116 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 ERGIC2Q96RQ1 377 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 GLIS2Q9BZE0 524 aaPredicted RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 ZNF277Q9NRM2 450 aaPredicted RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 CNTNAP1P78357 1384 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 PPIP5K2O43314 1243 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 SORBS3O60504 671 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 MED24O75448 989 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 TRIM49P0CI25 452 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 TRIM49CP0CI26 452 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 TCP1P17987 556 aaKnown RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 KCNA3P22001 575 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 IFT88Q13099 833 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 ZNF746Q6NUN9 644 aaPredicted RBP10.16□□□□□ -0.78
NDE1-201ENST00000396354 CASKIN2Q8WXE0 1202 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 FAM84AQ96KN4 292 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 SERPINA10Q9UK55 444 aa10.16□□□□□ -0.78
NDE1-201ENST00000396354 FAM86B1E9PN63 330 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 ERLIN2O94905 339 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 FAM86B2P0C5J1 330 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 SLCO1A2P46721 670 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 SPIRE1Q08AE8 756 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 RPS6KA1Q15418 735 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 GPATCH4Q5T3I0 446 aaKnown RBP10.15□□□□□ -0.78
NDE1-201ENST00000396354 AADACL2Q6P093 401 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 TAX1BP1Q86VP1 789 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 AENQ8WTP8 325 aaKnown RBP10.15□□□□□ -0.78
NDE1-201ENST00000396354 DNAJC17Q9NVM6 304 aaKnown RBP10.15□□□□□ -0.78
NDE1-201ENST00000396354 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 HDAC9Q9UKV0 1011 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 PLAAQ9Y263 795 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 ATRNL1Q5VV63 1379 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 GOLGA6L10A6NI86 522 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 DAPK3O43293 454 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 KIAA0754O94854 1291 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 CFBP00751 764 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 FLT3P36888 993 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 DGKZQ13574 1117 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 COG2Q14746 738 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 ABCB5Q2M3G0 1257 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 PPP4R3AQ6IN85 833 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 CCDC25Q86WR0 208 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 SCFD1Q8WVM8 642 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 CSRNP1Q96S65 589 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 TRIM51Q9BSJ1 452 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 MFRPQ9BY79 579 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 ANO3Q9BYT9 981 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 OSGEPQ9NPF4 335 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 GGT7Q9UJ14 662 aa10.15□□□□□ -0.78
NDE1-201ENST00000396354 RBBP6Q7Z6E9 1792 aaKnown RBP10.15□□□□□ -0.79
NDE1-201ENST00000396354 hCG_1984214I3L0E3 225 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 KRIT1O00522 736 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 CETN3O15182 167 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 NOL4O94818 638 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 FGFR1OPO95684 399 aaKnown RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 KRT13P13646 458 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms