RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 TBX3O15119 743 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 QARSP47897 775 aaKnown RBP11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 DRP2Q13474 957 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 ANO5Q75V66 913 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 PLPPR4Q7Z2D5 763 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 BRAPQ7Z569 592 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 UBE2OQ9C0C9 1292 aaKnown RBP11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 LOXHD1Q8IVV2 1947 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 MED24O75448 989 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 CSDE1O75534 798 aaKnown RBP11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 SLITRK3O94933 977 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 VTNP04004 478 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 OATP04181 439 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 ZSCAN22P10073 491 aaPredicted RBP11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 CKBP12277 381 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 CAPN2P17655 700 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 TMEM266Q2M3C6 531 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 C9orf50Q5SZB4 431 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 DTHD1Q6ZMT9 781 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 CLIC6Q96NY7 704 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 IGSF9BQ9UPX0 1349 aa11.32□□□□□ -0.6
THUMPD1-202ENST00000396083 ZBTB42B2RXF5 422 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 F13A1P00488 732 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 TIMP1P01033 207 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 PSMC5P62195 406 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 DNM1Q05193 864 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 ECM1Q16610 540 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 CATSPER3Q86XQ3 398 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 CEP170P1Q96L14 293 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 ZDHHC9Q9Y397 364 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 HBP1O60381 514 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 P4HBP07237 508 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 YWHABP31946 246 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 CCT6AP40227 531 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 TBC1D8BQ0IIM8 1120 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 SERINC5Q86VE9 423 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 AFAP1L1Q8TED9 768 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 SNX29Q8TEQ0 813 aa11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 CCDC43Q96MW1 224 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-202ENST00000396083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 KIAA0355O15063 1070 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 GNAT1P11488 350 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 EPHA7Q15375 998 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 KIZQ2M2Z5 673 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 MTHFD1LQ6UB35 978 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 USP49Q70CQ1 688 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 TMCO2Q7Z6W1 182 aaPredicted RBP11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 AKT3Q9Y243 479 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 SPATA31C1P0DKV0 1188 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 GHRP10912 638 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 ADAM17P78536 824 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 FPGSQ05932 587 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 MFSD5Q6N075 450 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 EFCAB12Q6NXP0 572 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 KSR1Q8IVT5 923 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 SCLT1Q96NL6 688 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 HSD17B14Q9BPX1 270 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 NRBP2Q9NSY0 501 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 KIAA1024Q9UPX6 916 aa11.3□□□□□ -0.6
THUMPD1-202ENST00000396083 ZBBXA8MT70 800 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 IQCF3P0C7M6 154 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 SLC26A2P50443 739 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 MBTPS1Q14703 1052 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 STK38Q15208 465 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 SHHQ15465 462 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 XKR3Q5GH77 459 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 PRPF38BQ5VTL8 546 aaKnown RBP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 ZNF365Q70YC5 407 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 LRRC8DQ7L1W4 858 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 C16orf59Q7L2K0 433 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 GDF15Q99988 308 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 DDX19AQ9NUU7 478 aaKnown RBP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 RSPH10B2B2RC85 870 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 USO1O60763 962 aaKnown RBP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 RSPH10BP0C881 870 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 PTK7Q13308 1070 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 BFSP2Q13515 415 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 TMEM199Q8N511 208 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 EPSTI1Q96J88 318 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 ZSCAN16Q9H4T2 348 aaPredicted RBP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 CXXC1Q9P0U4 656 aaPredicted RBP11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 MYO7AQ13402 2215 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 C5orf42Q9H799 3197 aa11.29□□□□□ -0.6
THUMPD1-202ENST00000396083 E9PMD0 336 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms