RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 VAT1LQ9HCJ6 419 aa15.84■□□□□ 0.13
VCPKMT-201ENST00000395859 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
VCPKMT-201ENST00000395859 WNT16Q9UBV4 365 aa15.84■□□□□ 0.13
VCPKMT-201ENST00000395859 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
VCPKMT-201ENST00000395859 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
VCPKMT-201ENST00000395859 SDHBP21912 280 aa15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 ATAT1Q5SQI0 421 aa15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 RARS2Q5T160 578 aaKnown RBP15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 MAML2Q8IZL2 1156 aaPredicted RBP15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 HINFPQ9BQA5 517 aa15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 FAM49AQ9H0Q0 323 aaPredicted RBP15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 ERAP1Q9NZ08 941 aa15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 RALYQ9UKM9 306 aaKnown RBP15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 NEDD4P46934 1319 aa15.83■□□□□ 0.12
VCPKMT-201ENST00000395859 GCOM1H8Y6P7 765 aaPredicted RBP15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 ZBTB5O15062 677 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 NARSO43776 548 aaKnown RBP15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 POLR2MP0CAP2 368 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 TGM1P22735 817 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 TBC1D8BQ0IIM8 1120 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 TMEM62Q0P6H9 643 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 COL9A2Q14055 689 aaPredicted RBP15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 TMEM266Q2M3C6 531 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 KCNT2Q6UVM3 1135 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 MFSD6Q6ZSS7 791 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 SLC24A5Q71RS6 500 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 STAG2Q8N3U4 1231 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 DCTPP1Q9H773 170 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 C1orf112Q9NSG2 853 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 PCDHA2Q9Y5H9 948 aa15.82■□□□□ 0.12
VCPKMT-201ENST00000395859 ATP9AO75110 1047 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 PARP1P09874 1014 aaKnown RBP15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 INSRRP14616 1297 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 HAND2P61296 217 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 SMC1AQ14683 1233 aaKnown RBP15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 TMC7Q7Z402 723 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 FCHSD1Q86WN1 690 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 C1orf210Q8IVY1 113 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 OTUD7AQ8TE49 926 aaPredicted RBP15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 SLC22A17Q8WUG5 538 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 CASD1Q96PB1 797 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 PCYT2Q99447 389 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 ADAM2Q99965 735 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 ELAC1Q9H777 363 aaKnown RBP15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 DZANK1Q9NVP4 752 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 TMEM161AQ9NX61 479 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 RTEL1Q9NZ71 1219 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 FBXL21Q9UKT6 434 aa15.81■□□□□ 0.12
VCPKMT-201ENST00000395859 C2orf16Q68DN1 1984 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 RRN3P2A6NIE6 340 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 CENPBP07199 599 aaPredicted RBP15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 FGFR1P11362 822 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 MS4A1P11836 297 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 GLULP15104 373 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 KCNA2P16389 499 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 MARK3P27448 753 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 PPM1AP35813 382 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 PBX3P40426 434 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 SP4Q02446 784 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 PHLDB3Q6NSJ2 640 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 XRRA1Q6P2D8 792 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 SLC39A11Q8N1S5 342 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 ENAHQ8N8S7 591 aaPredicted RBP15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 TMEM40Q8WWA1 233 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 ESR2Q92731 530 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 TMEM117Q9H0C3 514 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 HELLSQ9NRZ9 838 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 IGSF9Q9P2J2 1179 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 NOC2LQ9Y3T9 749 aaKnown RBP15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 IRAK3Q9Y616 596 aa15.8■□□□□ 0.12
VCPKMT-201ENST00000395859 POTEMA6NI47 508 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 PRR5-ARHGAP8B1AHC4 643 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 DHX16O60231 1041 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 N4BP1O75113 896 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 EPCAMP16422 314 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 NT5C2P49902 561 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 ARHGAP8P85298 464 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 DSC3Q14574 896 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 VARS2Q5ST30 1063 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 POTEGQ6S5H5 508 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 OTOP3Q7RTS5 596 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 GPR149Q86SP6 731 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 NME8Q8N427 588 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 GPR161Q8N6U8 529 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 ACSF2Q96CM8 615 aaPredicted RBP15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 BORCS6Q96GS4 357 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 RTKNQ9BST9 563 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 KAT14Q9H8E8 782 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 TBC1D17Q9HA65 648 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 CDHR5Q9HBB8 845 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 SPG21Q9NZD8 308 aa15.79■□□□□ 0.12
VCPKMT-201ENST00000395859 CNOT1A5YKK6 2376 aaKnown RBP15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 BAZ2BQ9UIF8 2168 aaKnown RBP15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 SMIM35A0A1B0GVV1 85 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 DCDC2BA2VCK2 349 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 M0QZ92 97 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms