RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 FNDC3AQ9Y2H6 1198 aaKnown RBP7.14□□□□□ -1.27
PTPN20-208ENST00000395727 SMCHD1A6NHR9 2005 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.13□□□□□ -1.27
PTPN20-208ENST00000395727 MYADML2A6NDP7 307 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 DCDC2CA8MYV0 355 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 B4DLN1 442 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 CD4P01730 458 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 CYP21A2P08686 494 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 PARP1P09874 1014 aaKnown RBP7.13□□□□□ -1.27
PTPN20-208ENST00000395727 RARAP10276 462 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 MRPL12P52815 198 aaKnown RBP7.13□□□□□ -1.27
PTPN20-208ENST00000395727 RPS6P62753 249 aaKnown RBP7.13□□□□□ -1.27
PTPN20-208ENST00000395727 FAAP100Q0VG06 881 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 TRDNQ13061 729 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 TRAF1Q13077 416 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 CDC37Q16543 378 aaPredicted RBP7.13□□□□□ -1.27
PTPN20-208ENST00000395727 IFIT1BQ5T764 474 aaKnown RBP7.13□□□□□ -1.27
PTPN20-208ENST00000395727 PDE12Q6L8Q7 609 aaKnown RBP7.13□□□□□ -1.27
PTPN20-208ENST00000395727 XKR5Q6UX68 686 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 NSMFQ6X4W1 530 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 RNF207Q6ZRF8 634 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 KRT25Q7Z3Z0 450 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 TLK2Q86UE8 772 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 MCF2L2Q86YR7 1114 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 FAM126BQ8IXS8 530 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 ADGRF4Q8IZF3 695 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 GJD3Q8N144 294 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 ZKSCAN3Q9BRR0 538 aa7.13□□□□□ -1.27
PTPN20-208ENST00000395727 RANBP2P49792 3224 aaKnown RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 TMEM265A0A087WTH1 108 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 ELOA3CA0A087WX78 387 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 PTPDC1A2A3K4 754 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 TRIM43BA6NCK2 446 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 ELOA3DA6NLF2 546 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 E7EWF7 191 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 ARVCFO00192 962 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 ZEB2O60315 1214 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 HOXD8P13378 290 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 PCSK2P16519 638 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 HSD17B4P51659 736 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 SNAP25P60880 206 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 SMAD3P84022 425 aaKnown RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 PTH1RQ03431 593 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 TROAPQ12815 778 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 SART3Q15020 963 aaKnown RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 FSCN1Q16658 493 aaKnown RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 QRICH1Q2TAL8 776 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 ELOA3BQ3SY89 546 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 BMP2KLQ5H9B9 411 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 SLC30A10Q6XR72 485 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 CYB5R4Q7L1T6 521 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 CENPQQ7L2Z9 268 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 FBXO16Q8IX29 292 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 MB21D2Q8IYB1 491 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 ELOA3Q8NG57 546 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 NCOA7Q8NI08 942 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 SCFD2Q8WU76 684 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 BADQ92934 168 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 TRIM43Q96BQ3 446 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 IWS1Q96ST2 819 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 AP5M1Q9H0R1 490 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 RIOX1Q9H6W3 641 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 JMJD4Q9H9V9 463 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 MAD2L2Q9UI95 211 aa7.12□□□□□ -1.27
PTPN20-208ENST00000395727 MRPL11Q9Y3B7 192 aaKnown RBP7.12□□□□□ -1.27
PTPN20-208ENST00000395727 TLR3O15455 904 aaKnown RBP7.11□□□□□ -1.27
PTPN20-208ENST00000395727 KPNA6O60684 536 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 PQBP1O60828 265 aaKnown RBP7.11□□□□□ -1.27
PTPN20-208ENST00000395727 MMP20O60882 483 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 TIMP1P01033 207 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 GOLGA8HP0CJ92 632 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 RAG1P15918 1043 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 HOXB4P17483 251 aaPredicted RBP7.11□□□□□ -1.27
PTPN20-208ENST00000395727 ITGB8P26012 769 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 SMARCA1P28370 1054 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 ADH7P40394 386 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 CPT1AP50416 773 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 FPGSQ05932 587 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 GRM4Q14833 912 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 RASIP1Q5U651 963 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 MFSD5Q6N075 450 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 CCDC62Q6P9F0 684 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 KIAA1211Q6ZU35 1233 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 DHX32Q7L7V1 743 aaKnown RBP7.11□□□□□ -1.27
PTPN20-208ENST00000395727 RALYLQ86SE5 291 aaKnown RBP7.11□□□□□ -1.27
PTPN20-208ENST00000395727 FBXO11Q86XK2 927 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 NSUN6Q8TEA1 469 aaKnown RBP7.11□□□□□ -1.27
PTPN20-208ENST00000395727 BTBD6Q96KE9 485 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 AMNQ9BXJ7 453 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 WDR11Q9BZH6 1224 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 PRDM5Q9NQX1 630 aaPredicted RBP7.11□□□□□ -1.27
PTPN20-208ENST00000395727 ENAMQ9NRM1 1142 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 TMEM39AQ9NV64 488 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 BRPF3Q9ULD4 1205 aa7.11□□□□□ -1.27
PTPN20-208ENST00000395727 GRIN2DO15399 1336 aa7.1□□□□□ -1.27
PTPN20-208ENST00000395727 FRMPD4Q14CM0 1322 aa7.1□□□□□ -1.27
PTPN20-208ENST00000395727 SCN10AQ9Y5Y9 1956 aa7.1□□□□□ -1.27
PTPN20-208ENST00000395727 MYH6P13533 1939 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms