RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 CACNB2Q08289 660 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-206ENST00000395722 TRIM32Q13049 653 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 COASYQ13057 564 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 TARBP2Q15633 366 aaKnown RBP16.8■□□□□ 0.28
PTPN20-206ENST00000395722 COBLL1Q53SF7 1204 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 XKR9Q5GH70 373 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 CT47A1Q5JQC4 288 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-206ENST00000395722 CCDC65Q8IXS2 484 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 CEP89Q96ST8 783 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 TIPINQ9BVW5 301 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 PDLIM7Q9NR12 457 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 PANK4Q9NVE7 773 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 ODF2LQ9ULJ1 636 aa16.8■□□□□ 0.28
PTPN20-206ENST00000395722 HMGCRP04035 888 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 LGALS2P05162 132 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 KRT18P05783 430 aaKnown RBP16.79■□□□□ 0.28
PTPN20-206ENST00000395722 ELNP15502 786 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 ZNF131P52739 623 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 MAPK7Q13164 816 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 PSMD2Q13200 908 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 TLK2Q86UE8 772 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 ATP8B4Q8TF62 1192 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 CYP26B1Q9NR63 512 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 SEPT9Q9UHD8 586 aaPredicted RBP16.79■□□□□ 0.28
PTPN20-206ENST00000395722 PPME1Q9Y570 386 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 PCDHA2Q9Y5H9 948 aa16.79■□□□□ 0.28
PTPN20-206ENST00000395722 PPP1R3GB7ZBB8 358 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 DUSP11O75319 330 aaKnown RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 IDEP14735 1019 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 ZNF165P49910 485 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 NKX3-2P78367 333 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 IQCB1Q15051 598 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 PLCB4Q15147 1175 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 DAW1Q8N136 415 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 BBXQ8WY36 941 aaPredicted RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 GLG1Q92896 1179 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 LENG1Q96BZ8 264 aaPredicted RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 CEP170P1Q96L14 293 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 C16orf70Q9BSU1 422 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 NRBP2Q9NSY0 501 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 TSKSQ9UJT2 592 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 GDAQ9Y2T3 454 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 GOLGA6L3A6NEY3 463 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 SEPT4O43236 478 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 GAP43P17677 238 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 RAD51AP2Q09MP3 1159 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 STK4Q13043 487 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 KIAA0895Q8NCT3 520 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 RAET1EQ8TD07 263 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 NAT10Q9H0A0 1025 aaKnown RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
PTPN20-206ENST00000395722 DACH1Q9UI36 760 aa16.78■□□□□ 0.28
PTPN20-206ENST00000395722 RSPH10B2B2RC85 870 aa16.77■□□□□ 0.28
PTPN20-206ENST00000395722 USO1O60763 962 aaKnown RBP16.77■□□□□ 0.28
PTPN20-206ENST00000395722 RSPH10BP0C881 870 aa16.77■□□□□ 0.28
PTPN20-206ENST00000395722 PRKAR2AP13861 404 aaKnown RBP16.77■□□□□ 0.28
PTPN20-206ENST00000395722 DGKDQ16760 1214 aa16.77■□□□□ 0.28
PTPN20-206ENST00000395722 SMYD4Q8IYR2 804 aaPredicted RBP16.77■□□□□ 0.28
PTPN20-206ENST00000395722 ADSSL1Q8N142 457 aa16.77■□□□□ 0.28
PTPN20-206ENST00000395722 SH2D3AQ9BRG2 576 aa16.77■□□□□ 0.28
PTPN20-206ENST00000395722 ERAP1Q9NZ08 941 aa16.77■□□□□ 0.28
PTPN20-206ENST00000395722 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.28
PTPN20-206ENST00000395722 ZBTB42B2RXF5 422 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 TBCAO75347 108 aaKnown RBP16.77■□□□□ 0.27
PTPN20-206ENST00000395722 DGAT1O75907 488 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 ERCC5P28715 1186 aaPredicted RBP16.77■□□□□ 0.27
PTPN20-206ENST00000395722 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 SLAIN1Q8ND83 568 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 HPS3Q969F9 1004 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 AP5M1Q9H0R1 490 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 DHX33Q9H6R0 707 aaKnown RBP16.77■□□□□ 0.27
PTPN20-206ENST00000395722 XPNPEP1Q9NQW7 623 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 OLFML3Q9NRN5 406 aa16.77■□□□□ 0.27
PTPN20-206ENST00000395722 HIP1RO75146 1068 aa16.76■□□□□ 0.27
PTPN20-206ENST00000395722 PRCPP42785 496 aa16.76■□□□□ 0.27
PTPN20-206ENST00000395722 GJA9P57773 515 aa16.76■□□□□ 0.27
PTPN20-206ENST00000395722 HERC4Q5GLZ8 1057 aaPredicted RBP16.76■□□□□ 0.27
PTPN20-206ENST00000395722 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
PTPN20-206ENST00000395722 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
PTPN20-206ENST00000395722 RNF214Q8ND24 703 aa16.76■□□□□ 0.27
PTPN20-206ENST00000395722 MED15Q96RN5 788 aa16.76■□□□□ 0.27
PTPN20-206ENST00000395722 SEL1LQ9UBV2 794 aa16.76■□□□□ 0.27
PTPN20-206ENST00000395722 HBP1O60381 514 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 FAM13AO94988 1023 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 ZNF286BP0CG31 522 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 CCND3P30281 292 aaPredicted RBP16.75■□□□□ 0.27
PTPN20-206ENST00000395722 RFC5P40937 340 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 CPT1AP50416 773 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 MTERF2Q49AM1 385 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 TRMT1LQ7Z2T5 733 aaKnown RBP16.75■□□□□ 0.27
PTPN20-206ENST00000395722 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 FIZ1Q96SL8 496 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 PARVGQ9HBI0 331 aa16.75■□□□□ 0.27
PTPN20-206ENST00000395722 F2P00734 622 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms