RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 RNF19AQ9NV58 838 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 MRPL42Q9Y6G3 142 aaKnown RBP7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 C2orf16Q68DN1 1984 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 FANCMQ8IYD8 2048 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 SKIP12755 728 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 HOXB8P17481 243 aaPredicted RBP7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 STAT5BP51692 787 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 SLC24A5Q71RS6 500 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 HOMER1Q86YM7 354 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 LENG9Q96B70 501 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 TM6SF1Q9BZW5 370 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 ADAMTS10Q9H324 1103 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 AZI2Q9H6S1 392 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 CD320Q9NPF0 282 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 PROB1E7EW31 1015 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 PPM1AP35813 382 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 PAK2Q13177 524 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 RTN1Q16799 776 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 SPRED2Q7Z698 418 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 ZNF598Q86UK7 904 aaKnown RBP7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 MFSD14AQ96MC6 490 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 OSBPL7Q9BZF2 842 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 TMEM117Q9H0C3 514 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 S1PR5Q9H228 398 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 CLEC1BQ9P126 229 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 STK36Q9NRP7 1315 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 KIF26AQ9ULI4 1882 aaPredicted RBP7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 POU2F2P09086 479 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 SRGAP2BP0DMP2 458 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 HSPA4P34932 840 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 CTNNB1P35222 781 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 JAK3P52333 1124 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 POU5F1BQ06416 359 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 NTRK3Q16288 839 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 SYNE3Q6ZMZ3 975 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 CHST3Q7LGC8 479 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 KIAA0319LQ8IZA0 1049 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 CCDC148Q8NFR7 591 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 HDAC7Q8WUI4 952 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 AGO3Q9H9G7 860 aaKnown RBP7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 ALG13Q9NP73 1137 aaKnown RBP7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 PADI3Q9ULW8 664 aa7.09□□□□□ -1.27
SMARCAD1-203ENST00000394961 ZBTB43O43298 467 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 TBX10O75333 385 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 CCNE2O96020 404 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 ITGB1P05556 798 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 IL9P15248 144 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 ATP4AP20648 1035 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 GNA11P29992 359 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 TYW1BQ6NUM6 668 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 IFNLR1Q8IU57 520 aaPredicted RBP7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZDHHC14Q8IZN3 488 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 COLGALT1Q8NBJ5 622 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 DNAJB3Q8WWF6 145 aa7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 NAP1L4Q99733 375 aaKnown RBP7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 NGRNQ9NPE2 291 aaKnown RBP7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 RANBP2P49792 3224 aaKnown RBP7.09□□□□□ -1.28
SMARCAD1-203ENST00000394961 BAZ2BQ9UIF8 2168 aaKnown RBP7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 GRM6O15303 877 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 GAS2O43903 313 aaKnown RBP7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 STBD1O95210 358 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 PSAPP07602 524 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 IFNAR1P17181 557 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 KRT40Q6A162 431 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF410Q86VK4 478 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 MYOCDQ8IZQ8 938 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 MRPS27Q92552 414 aaKnown RBP7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 MRPL9Q9BYD2 267 aaKnown RBP7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF302Q9NR11 478 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 DZANK1Q9NVP4 752 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF623O75123 536 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 TRIM50Q86XT4 487 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 KHSRPQ92945 711 aaKnown RBP eCLIP7.08□□□□□ -1.283e-7■■■■□ 24
SMARCAD1-203ENST00000394961 NECTIN4Q96NY8 510 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 CASD1Q96PB1 797 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 C6orf50Q9HD87 102 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 TELO2Q9Y4R8 837 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 TBX3O15119 743 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 EDIL3O43854 480 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 CDC45O75419 566 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 ARP10275 920 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZXDAP98168 799 aa7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 CMASQ8NFW8 434 aaPredicted RBP7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 NECAB3Q96P71 396 aaPredicted RBP7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 PHF7Q9BWX1 381 aaPredicted RBP7.08□□□□□ -1.28
SMARCAD1-203ENST00000394961 GLP2RO95838 553 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 GHRP10912 638 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 RAB27AP51159 221 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 BTG3Q14201 252 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 UTP14CQ5TAP6 766 aaKnown RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 MRPL10Q7Z7H8 261 aaKnown RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 LRRC43Q8N309 656 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 JPH2Q9BR39 696 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 TMEM175Q9BSA9 504 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 RTEL1Q9NZ71 1219 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 PCDHB12Q9Y5F1 795 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 PCDHA10Q9Y5I2 948 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 SMCO2A6NFE2 343 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 DNAJB1P25685 340 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms