RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 TNFRSF21O75509 655 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 OR52Z1P0C646 297 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 YY1P25490 414 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 PMLP29590 882 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 TECP42680 631 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 MAP3K10Q02779 954 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 SPP2Q13103 211 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 FCHSD1Q86WN1 690 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 APOBEC3FQ8IUX4 373 aaKnown RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 CEP57L1Q8IYX8 460 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 BCO2Q9BYV7 579 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 BLZF1Q9H2G9 400 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 SH2D4AQ9H788 454 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 TMEM51Q9NW97 253 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 BHMG1C9JSJ3 638 aaPredicted RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 ADM5C9JUS6 153 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 GOLGA6L19H0YKK7 550 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 MEIS2O14770 477 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 CFBP00751 764 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 UBA7P41226 1012 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 UBXN2AP68543 259 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 CALCRLQ16602 461 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 FBXL19Q6PCT2 694 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 ALDH16A1Q8IZ83 802 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 CPXCR1Q8N123 301 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 SPC24Q8NBT2 197 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 TTC16Q8NEE8 873 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 PPP1R9BQ96SB3 815 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 MPHOSPH6Q99547 160 aaKnown RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 ANO3Q9BYT9 981 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 KLK14Q9P0G3 267 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 USP3Q9Y6I4 520 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 POTEMA6NI47 508 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 IFRD1O00458 451 aaPredicted RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 ARHGAP33O14559 1287 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 CTNND1O60716 968 aaKnown RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 NLRP12P59046 1061 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 IQCB1Q15051 598 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 UVSSAQ2YD98 709 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 HSP90AA4PQ58FG1 418 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 DCAF15Q66K64 600 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 ARL6IP4Q66PJ3 421 aaKnown RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 BTNL9Q6UXG8 535 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 PDLIM2Q96JY6 352 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 FOXD3Q9UJU5 478 aaPredicted RBP6.57□□□□□ -1.36
CASC3-202ENST00000394114 ZHX2Q9Y6X8 837 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 DOCK1Q14185 1865 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 SPDYE3A6NKU9 549 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 ALG1L2C9J202 215 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 GREM1O60565 184 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 FLOT1O75955 427 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 KRT18P05783 430 aaKnown RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 BMP6P22004 513 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 LONP1P36776 959 aaKnown RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 TXLNAP40222 546 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 STAT6P42226 847 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 MMP14P50281 582 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 PPP2R5AQ15172 486 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 DMRTA1Q5VZB9 504 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 MAMSTRQ6ZN01 415 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 THNSL2Q86YJ6 484 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 TREML1Q86YW5 311 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 DHX40Q8IX18 779 aaKnown RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 SMYD4Q8IYR2 804 aaPredicted RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 FAM169BQ8N8A8 192 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 CHURC1Q8WUH1 139 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 SMARCE1Q969G3 411 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 PAGE5Q96GU1 130 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 RHOVQ96L33 236 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 AGBL1Q96MI9 1066 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 TRIM56Q9BRZ2 755 aaKnown RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 TRIM5Q9C035 493 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 NPHS2Q9NP85 383 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 CHST12Q9NRB3 414 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 PICK1Q9NRD5 415 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 DDX25Q9UHL0 483 aaKnown RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 HOOK1Q9UJC3 728 aaKnown RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 TUBE1Q9UJT0 475 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 MAPK8IP1Q9UQF2 711 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 SSC5DA1L4H1 1573 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 SLFN14P0C7P3 912 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 VCAM1P19320 739 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 CNGA1P29973 690 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 STAT3P40763 770 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 HMGCS2P54868 508 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 SYCP2LQ5T4T6 812 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 SH3PXD2AQ5TCZ1 1133 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 DDX42Q86XP3 938 aaKnown RBP eCLIP6.56□□□□□ -1.36
CASC3-202ENST00000394114 IQUBQ8NA54 791 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 LRRC15Q8TF66 581 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 MTRQ99707 1265 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 SENP7Q9BQF6 1050 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 NAT10Q9H0A0 1025 aaKnown RBP6.56□□□□□ -1.36
CASC3-202ENST00000394114 ST7Q9NRC1 585 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 MAN1B1Q9UKM7 699 aa6.56□□□□□ -1.36
CASC3-202ENST00000394114 CDK2AP1O14519 115 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms