RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TRIOBPQ9H2D6 2365 aa21.29■■□□□ 1
PDLIM7-204ENST00000393546 POTEMA6NI47 508 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 C22orf31O95567 290 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 ACTN1P12814 892 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 PRPHP41219 470 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 TBC1D8BQ0IIM8 1120 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 BECN1Q14457 450 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 PDIA5Q14554 519 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 TARBP2Q15633 366 aaKnown RBP21.28■■□□□ 1
PDLIM7-204ENST00000393546 MTERF2Q49AM1 385 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 IER5Q5VY09 327 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 DTHD1Q6ZMT9 781 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 METTL13Q8N6R0 699 aa21.28■■□□□ 1
PDLIM7-204ENST00000393546 RNPC3Q96LT9 517 aaKnown RBP21.28■■□□□ 1
PDLIM7-204ENST00000393546 MTIF3Q9H2K0 278 aaKnown RBP21.28■■□□□ 1
PDLIM7-204ENST00000393546 TANC1Q9C0D5 1861 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 NBNO60934 754 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 CXCL10P02778 98 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 TMOD1P28289 359 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 MRPS6P82932 125 aaKnown RBP21.27■■□□□ 1
PDLIM7-204ENST00000393546 RESTQ13127 1097 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 GPNMBQ14956 572 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 ANO5Q75V66 913 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 HERVK_113Q902F9 699 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 VWCEQ96DN2 955 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 WRAP73Q9P2S5 460 aaPredicted RBP21.27■■□□□ 1
PDLIM7-204ENST00000393546 LRWD1Q9UFC0 647 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 STK24Q9Y6E0 443 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 EVPLQ92817 2033 aa21.27■■□□□ 1
PDLIM7-204ENST00000393546 M0QZ92 97 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 LYPLA2O95372 231 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 BMP15O95972 392 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 CHRNA1P02708 482 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 YWHABP31946 246 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 ATP2C1P98194 919 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 EFCAB12Q6NXP0 572 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 OTOP2Q7RTS6 562 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 KIAA0319LQ8IZA0 1049 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 POLR3CQ9BUI4 534 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 TUFT1Q9NNX1 390 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 PPME1Q9Y570 386 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 CDY2AQ9Y6F7 541 aa21.26■□□□□ 0.99
PDLIM7-204ENST00000393546 TMEM150BA6NC51 233 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 MGAT3Q09327 533 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 MBTPS1Q14703 1052 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 LRIT3Q3SXY7 679 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 ARL6IP4Q66PJ3 421 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 EXOC8Q8IYI6 725 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 CEP170P1Q96L14 293 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 JPH2Q9BR39 696 aaPredicted RBP21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 SH2D3AQ9BRG2 576 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 SUGCTQ9HAC7 445 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 CYP26B1Q9NR63 512 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 TRPV2Q9Y5S1 764 aa21.25■□□□□ 0.99
PDLIM7-204ENST00000393546 SPATA31C1P0DKV0 1188 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 XRCC6P12956 609 aaKnown RBP eCLIP21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 RPA1P27694 616 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 NPEPPSP55786 919 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 TMEM62Q0P6H9 643 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 XKR9Q5GH70 373 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 HAUS3Q68CZ6 603 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 PLA2G4FQ68DD2 849 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 CNKSR3Q6P9H4 555 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 CATSPER3Q86XQ3 398 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 IGSF22Q8N9C0 903 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 TET1Q8NFU7 2136 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 MAP7D2Q96T17 732 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 CELF4Q9BZC1 486 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 ANKEF1Q9NU02 776 aa21.24■□□□□ 0.99
PDLIM7-204ENST00000393546 RANBP2P49792 3224 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 ZBBXA8MT70 800 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 MAFO75444 373 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 MED24O75448 989 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 DNM2P50570 870 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 CLCN3P51790 818 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 SF3A1Q15459 793 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 IL17AQ16552 155 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 RASIP1Q5U651 963 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 LRRC71Q8N4P6 559 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 SEPT8Q92599 483 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 CEP89Q96ST8 783 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 AKT3Q9Y243 479 aa21.23■□□□□ 0.99
PDLIM7-204ENST00000393546 ZBTB39O15060 712 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 BAIAP3O94812 1187 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 MUTP22033 750 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 CCT6AP40227 531 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 IKBKEQ14164 716 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 PLEKHG4Q58EX7 1191 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 KRT79Q5XKE5 535 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 FAM173BQ6P4H8 233 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 ZNF710Q8N1W2 664 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 LINC01465Q8N7H1 131 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 DBF4BQ8NFT6 615 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 SLC7A3Q8WY07 619 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 CCDC43Q96MW1 224 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 NACC1Q96RE7 527 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 SLC4A7Q9Y6M7 1214 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 SQORQ9Y6N5 450 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 KDM3AQ9Y4C1 1321 aa21.22■□□□□ 0.99
PDLIM7-204ENST00000393546 IGKV6-21A0A0C4DH24 114 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms