RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 BZW1Q7L1Q6 419 aaKnown RBP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 ZNF572Q7Z3I7 529 aaPredicted RBP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 SPDYE1Q8NFV5 336 aaPredicted RBP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 RAD54LQ92698 747 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 PPP1R12CQ9BZL4 782 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 RNF14Q9UBS8 474 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 AMFRQ9UKV5 643 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 C21orf2O43822 256 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 UBE4AQ14139 1066 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 CRYMQ14894 314 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 KRT25Q7Z3Z0 450 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 CCDC50Q8IVM0 306 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 MREGQ8N565 214 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 NEK9Q8TD19 979 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 TMEM237Q96Q45 408 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 A1CFQ9NQ94 594 aaKnown RBP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 CETN3O15182 167 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 CTNNBL1Q8WYA6 563 aaPredicted RBP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 BTBD6Q96KE9 485 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 ZNF570Q96NI8 536 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 DDX23Q9BUQ8 820 aaKnown RBP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 FAM129AQ9BZQ8 928 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 TAS2R14Q9NYV8 317 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 TRPC6Q9Y210 931 aa17.76■□□□□ 0.43
PHTF1-205ENST00000393357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
PHTF1-205ENST00000393357 TNFRSF8P28908 595 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 GNA11P29992 359 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 XRCC4Q13426 336 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 MTM1Q13496 603 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 TAF11Q15544 211 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 CCDC105Q8IYK2 499 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 RPGRQ92834 1020 aaKnown RBP17.75■□□□□ 0.43
PHTF1-205ENST00000393357 ATP6V0A4Q9HBG4 840 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 GCNT4Q9P109 453 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 ARMCX3Q9UH62 379 aaPredicted RBP17.75■□□□□ 0.43
PHTF1-205ENST00000393357 PCDHA12Q9UN75 941 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 GOLGA6L10A0A0M3HER8 536 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L15C9J2P7 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L13C9JLJ4 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L11C9JVI0 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L18D6R9N7 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L22D6RA61 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L17D6RBQ6 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L19D6RCP7 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L20D6RJB6 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 PPIP5K2O43314 1243 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 LCA5LO95447 670 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 PCK1P35558 622 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 LRRC63Q05C16 580 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L24Q0WX57 530 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 MTMR3Q13615 1198 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 ERMARDQ5T6L9 678 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 USP17L6PQ6QN14 398 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 SLC35G2Q8TBE7 412 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 C15orf41Q9Y2V0 281 aa17.75■□□□□ 0.43
PHTF1-205ENST00000393357 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 MGRN1O60291 552 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 HIBADHP31937 336 aaKnown RBP17.74■□□□□ 0.43
PHTF1-205ENST00000393357 MESDQ14696 234 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 BCL9LQ86UU0 1499 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 PALB2Q86YC2 1186 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 ACP6Q9NPH0 428 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 ANKIB1Q9P2G1 1089 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 MINPP1Q9UNW1 487 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 IGSF9BQ9UPX0 1349 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 PLCB4Q15147 1175 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 RFX8Q6ZV50 586 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 RNF217Q8TC41 542 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 EYA3Q99504 573 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 FLOT1O75955 427 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 ADAMTS2O95450 1211 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 NSMFQ6X4W1 530 aa17.74■□□□□ 0.43
PHTF1-205ENST00000393357 PIAS1O75925 651 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 XRCC5P13010 732 aaKnown RBP17.73■□□□□ 0.43
PHTF1-205ENST00000393357 GJC1P36383 396 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 PSMC6P62333 389 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 TTBK2Q6IQ55 1244 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 LRIG3Q6UXM1 1119 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 HOOK3Q86VS8 718 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 LONP2Q86WA8 852 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 AK8Q96MA6 479 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 ETNK1Q9HBU6 452 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 CTTNBP2NLQ9P2B4 639 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
PHTF1-205ENST00000393357 PPP1R12AO14974 1030 aaPredicted RBP17.73■□□□□ 0.43
PHTF1-205ENST00000393357 GCNT3O95395 438 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 MYL1P05976 194 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 TRIM49P0CI25 452 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 TRIM49CP0CI26 452 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 SCFD1Q8WVM8 642 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 ARHGEF26Q96DR7 871 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 CEP95Q96GE4 821 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 BTG4Q9NY30 223 aa17.73■□□□□ 0.43
PHTF1-205ENST00000393357 NOP53Q9NZM5 478 aaKnown RBP17.73■□□□□ 0.43
PHTF1-205ENST00000393357 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
PHTF1-205ENST00000393357 MYH7P12883 1935 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms