RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NOC3LQ8WTT2 800 aaKnown RBP16.51■□□□□ 0.23
MKS1-202ENST00000393119 MS4A4AQ96JQ5 239 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
MKS1-202ENST00000393119 TSG101Q99816 390 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 NDST4Q9H3R1 872 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 PNMA2Q9UL42 364 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 BTBD19C9JJ37 291 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 ARIH2O95376 493 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 ABL1P00519 1130 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 TNNT1P13805 278 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 KRT9P35527 623 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 STXBP2Q15833 593 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 CCDC40Q4G0X9 1142 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 XKR9Q5GH70 373 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
MKS1-202ENST00000393119 JPH1Q9HDC5 661 aaPredicted RBP16.51■□□□□ 0.23
MKS1-202ENST00000393119 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
MKS1-202ENST00000393119 STBD1O95210 358 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 SNAPC2Q13487 334 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 CST9Q5W186 159 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 ZNF720Q7Z2F6 126 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 SLC9A2Q9UBY0 812 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 USP20Q9Y2K6 914 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 PCDHA10Q9Y5I2 948 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 PDHXO00330 501 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 SOCS7O14512 581 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 AKAP3O75969 853 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 PPP1R2P41236 205 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 PSMC5P62195 406 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 NCBP1Q09161 790 aaKnown RBP16.5■□□□□ 0.23
MKS1-202ENST00000393119 FAM178BQ8IXR5 827 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 FAM133AQ8N9E0 248 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 PTPN18Q99952 460 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 ABHD10Q9NUJ1 306 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
MKS1-202ENST00000393119 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
MKS1-202ENST00000393119 ATP4AP20648 1035 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 DNM2P50570 870 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 KRT76Q01546 638 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 KCNMA1Q12791 1236 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 REXO1L1PQ8IX06 675 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 GBA2Q9HCG7 927 aaPredicted RBP16.49■□□□□ 0.23
MKS1-202ENST00000393119 ITIH6Q6UXX5 1313 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 CCL15-CCL14A0A0B4J2E2 113 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 FANCGO15287 622 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 UBA1P22314 1058 aaKnown RBP16.49■□□□□ 0.23
MKS1-202ENST00000393119 ZNF131P52739 623 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 ERVK-9P63128 1117 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 CCL15Q16663 113 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 FAM102BQ5T8I3 360 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
MKS1-202ENST00000393119 FAM114A1Q8IWE2 563 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 RDH13Q8NBN7 331 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 COPS5Q92905 334 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 PDGFCQ9NRA1 345 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 PCDHB13Q9Y5F0 798 aa16.49■□□□□ 0.23
MKS1-202ENST00000393119 LOC285556D6RIA3 1793 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 EIF3JO75822 258 aaKnown RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 OSBPP22059 807 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 ABHD15Q6UXT9 468 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 FBXO16Q8IX29 292 aaPredicted RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 C4orf19Q8IY42 314 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 ACRBPQ8NEB7 543 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 BSNDQ8WZ55 320 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 IRX2Q9BZI1 471 aaPredicted RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 TTYH3Q9C0H2 523 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 MMRN2Q9H8L6 949 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 OLFML3Q9NRN5 406 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 OGFRQ9NZT2 677 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 KIAA1217Q5T5P2 1943 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 ZC3H4Q9UPT8 1303 aaKnown RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 A0A0U1RQG5 324 aaPredicted RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 SLC16A4O15374 487 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 NR3C1P04150 777 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 TRIM21P19474 475 aaKnown RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 GUCY2CP25092 1073 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 JAK3P52333 1124 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 PEX3P56589 373 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 MAN2A1Q16706 1144 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 GJC2Q5T442 439 aaPredicted RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 ZNF746Q6NUN9 644 aaPredicted RBP16.48■□□□□ 0.23
MKS1-202ENST00000393119 XRRA1Q6P2D8 792 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 WDR59Q6PJI9 974 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 NYAP1Q6ZVC0 841 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 DNERQ8NFT8 737 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 CEP170P1Q96L14 293 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 MMP19Q99542 508 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 PCIF1Q9H4Z3 704 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 SIK3Q9Y2K2 1263 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 PPP2R2CQ9Y2T4 447 aa16.48■□□□□ 0.23
MKS1-202ENST00000393119 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.234e-6■■■□□ 15.3
MKS1-202ENST00000393119 K7ENM7 598 aa16.47■□□□□ 0.23
MKS1-202ENST00000393119 STX10O60499 249 aa16.47■□□□□ 0.23
MKS1-202ENST00000393119 CYP2J2P51589 502 aa16.47■□□□□ 0.23
MKS1-202ENST00000393119 GNPTABQ3T906 1256 aa16.47■□□□□ 0.23
MKS1-202ENST00000393119 NEK9Q8TD19 979 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms