RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MYL3P08590 195 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 RGS19P49795 217 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 PTK7Q13308 1070 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 TRIM71Q2Q1W2 868 aaKnown RBP14.82□□□□□ -0.04
USP44-202ENST00000393091 IFNLR1Q8IU57 520 aaPredicted RBP14.82□□□□□ -0.04
USP44-202ENST00000393091 NME8Q8N427 588 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 NFKBIZQ9BYH8 718 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 PP2D1A8MPX8 630 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 TFRCP02786 760 aaKnown RBP14.81□□□□□ -0.04
USP44-202ENST00000393091 ZNF286BP0CG31 522 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 CDC42EP1Q00587 391 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 ITGA7Q13683 1181 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 KIAA0753Q2KHM9 967 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 C1orf186Q6ZWK4 172 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 USP49Q70CQ1 688 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 SERINC5Q86VE9 423 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 BANK1Q8NDB2 785 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 GLT1D1Q96MS3 346 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 SQORQ9Y6N5 450 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 SLFN14P0C7P3 912 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 PFKFB1P16118 471 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 ZNF131P52739 623 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 IRX5P78411 483 aaPredicted RBP14.81□□□□□ -0.04
USP44-202ENST00000393091 MDM2Q00987 491 aaPredicted RBP14.81□□□□□ -0.04
USP44-202ENST00000393091 FAM160A1Q05DH4 1040 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 NBPF20Q3BBV1 942 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 FAM126BQ8IXS8 530 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 IQUBQ8NA54 791 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 GOLPH3LQ9H4A5 285 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 C17orf75Q9HAS0 396 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 KCNH3Q9ULD8 1083 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 DNM3Q9UQ16 869 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 DGAT1O75907 488 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 PLCG1P19174 1290 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 CEBPZQ03701 1054 aaKnown RBP14.81□□□□□ -0.04
USP44-202ENST00000393091 C7orf25Q9BPX7 421 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 ODF2LQ9ULJ1 636 aa14.81□□□□□ -0.04
USP44-202ENST00000393091 CHMP2AO43633 222 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 CTTNQ14247 550 aaKnown RBP14.8□□□□□ -0.04
USP44-202ENST00000393091 HIC1Q14526 733 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 GRIK4Q16099 956 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 KANK3Q6NY19 840 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 MTHFD1LQ6UB35 978 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 SPATA20Q8TB22 786 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 CHAMP1Q96JM3 812 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 DDX19AQ9NUU7 478 aaKnown RBP14.8□□□□□ -0.04
USP44-202ENST00000393091 MAPTP10636 758 aaKnown RBP14.8□□□□□ -0.04
USP44-202ENST00000393091 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 KCNK18Q7Z418 384 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 NECAB2Q7Z6G3 386 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 KIAA1024Q9UPX6 916 aa14.8□□□□□ -0.04
USP44-202ENST00000393091 C17orf102A2RUQ5 167 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 CYP11B2P19099 503 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 ARL2P36404 184 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 EHHADHQ08426 723 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 TAF2Q6P1X5 1199 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 POTEGQ6S5H5 508 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 LARP4BQ92615 738 aaKnown RBP14.79□□□□□ -0.04
USP44-202ENST00000393091 KCNG1Q9UIX4 513 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 SAMM50Q9Y512 469 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 INSRRP14616 1297 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 PSMC6P62333 389 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 TPH2Q8IWU9 490 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 LMBR1Q8WVP7 490 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 GLG1Q92896 1179 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 ST6GALNAC4Q9H4F1 302 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 STARD7Q9NQZ5 370 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 PHLPP2Q6ZVD8 1323 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 BACH1O14867 736 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 UTP14CQ5TAP6 766 aaKnown RBP14.79□□□□□ -0.04
USP44-202ENST00000393091 NT5DC1Q5TFE4 455 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 RRAGBQ5VZM2 374 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 TRIM50Q86XT4 487 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 MCPH1Q8NEM0 835 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 NTPCRQ9BSD7 190 aaKnown RBP14.79□□□□□ -0.04
USP44-202ENST00000393091 COL4A6Q14031 1691 aa14.79□□□□□ -0.04
USP44-202ENST00000393091 EVPLQ92817 2033 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 DDX11L8A8MPP1 907 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 ASAP2O43150 1006 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 ABCD1P33897 745 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 NDUFA8P51970 172 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 MGAT3Q09327 533 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 PPFIA1Q13136 1202 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 KARSQ15046 597 aaKnown RBP14.78□□□□□ -0.04
USP44-202ENST00000393091 PCBP1Q15365 356 aaKnown RBP eCLIP14.78□□□□□ -0.04
USP44-202ENST00000393091 COBLL1Q53SF7 1204 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 ARSHQ5FYA8 562 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 TMEM174Q8WUU8 243 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 TCP11Q8WWU5 503 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 HDAC6Q9UBN7 1215 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 PARNO95453 639 aaKnown RBP14.78□□□□□ -0.04
USP44-202ENST00000393091 PLA2G4BP0C869 781 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 MCM4P33991 863 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 RINT1Q6NUQ1 792 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 TRAF7Q6Q0C0 670 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
USP44-202ENST00000393091 CAGE1Q8TC20 777 aa14.78□□□□□ -0.04
USP44-202ENST00000393091 GTPBP4Q9BZE4 634 aaKnown RBP14.78□□□□□ -0.04
USP44-202ENST00000393091 PITPNM1O00562 1244 aa14.77□□□□□ -0.04
USP44-202ENST00000393091 IER5Q5VY09 327 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms