RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ZFYVE16Q7Z3T8 1539 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 A0A1W2PQC6 194 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 TJP3O95049 919 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 NCF2P19878 526 aaPredicted RBP14.09□□□□□ -0.15
LCA5-202ENST00000392959 SPOPLQ6IQ16 392 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 KRT80Q6KB66 452 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 ERICH1Q86X53 443 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 FOXP4Q8IVH2 680 aaPredicted RBP14.09□□□□□ -0.15
LCA5-202ENST00000392959 GUF1Q8N442 669 aaKnown RBP14.09□□□□□ -0.15
LCA5-202ENST00000392959 A0A0G2JND7 137 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 FOXN1O15353 648 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 PPP2R2AP63151 447 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 SGMS1Q86VZ5 419 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 PRPF31Q8WWY3 499 aaKnown RBP14.09□□□□□ -0.15
LCA5-202ENST00000392959 THOC1Q96FV9 657 aaKnown RBP14.09□□□□□ -0.15
LCA5-202ENST00000392959 SNX25Q9H3E2 840 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 CPVLQ9H3G5 476 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 INTUQ9ULD6 942 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 ESYT2A0FGR8 921 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 HDLBPQ00341 1268 aaKnown RBP14.09□□□□□ -0.15
LCA5-202ENST00000392959 SURF1Q15526 300 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 C4orf50Q6ZRC1 276 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 FAM160B2Q86V87 743 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 SRRM1Q8IYB3 904 aaKnown RBP14.09□□□□□ -0.15
LCA5-202ENST00000392959 ATP6V1E2Q96A05 226 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
LCA5-202ENST00000392959 E9PMD0 336 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 NCK2O43639 380 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 EIF2AK2P19525 551 aaKnown RBP14.08□□□□□ -0.15
LCA5-202ENST00000392959 PRDX5P30044 214 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 ART3Q13508 389 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 PDXDC2PQ6P474 469 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 XXYLT1Q8NBI6 393 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 RAD54LQ92698 747 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 TTC17Q96AE7 1141 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 SERPINI1Q99574 410 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 LRRC4Q9HBW1 653 aa14.08□□□□□ -0.15
LCA5-202ENST00000392959 PACSIN2Q9UNF0 486 aaPredicted RBP14.08□□□□□ -0.15
LCA5-202ENST00000392959 PLA2R1Q13018 1463 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 COASYQ13057 564 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 NR1H3Q13133 447 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 HLFQ16534 295 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 BEND6Q5SZJ8 279 aaPredicted RBP14.08□□□□□ -0.16
LCA5-202ENST00000392959 MYLK4Q86YV6 388 aaPredicted RBP14.08□□□□□ -0.16
LCA5-202ENST00000392959 WDR75Q8IWA0 830 aaKnown RBP14.08□□□□□ -0.16
LCA5-202ENST00000392959 CFAP36Q96G28 342 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 TAF1DQ9H5J8 278 aaPredicted RBP14.08□□□□□ -0.16
LCA5-202ENST00000392959 ZBTB5O15062 677 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 CFLARO15519 480 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 KCNJ6P48051 423 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 ARL4CP56559 192 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 OSTNP61366 133 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 MTF1Q14872 753 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 IQCB1Q15051 598 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 GRAMD1BQ3KR37 738 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 RSBN1LQ6PCB5 846 aaPredicted RBP14.08□□□□□ -0.16
LCA5-202ENST00000392959 ZBTB33Q86T24 672 aa14.08□□□□□ -0.16
LCA5-202ENST00000392959 RBM41Q96IZ5 413 aaKnown RBP14.08□□□□□ -0.16
LCA5-202ENST00000392959 XAB2Q9HCS7 855 aaKnown RBP14.08□□□□□ -0.16
LCA5-202ENST00000392959 GRID2IPA4D2P6 1211 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 H0Y3Z8 333 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 CYP27B1O15528 508 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 ATP5HO75947 161 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 CASP2P42575 452 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 PHEXP78562 749 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 TMPRSS15P98073 1019 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 SLFN12LQ6IEE8 588 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 CRLF3Q8IUI8 442 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 DPF2Q92785 391 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 NUDCD1Q96RS6 583 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 HEMGNQ9BXL5 484 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 NGRNQ9NPE2 291 aaKnown RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 PPARGC1AQ9UBK2 798 aaKnown RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 MAGED2Q9UNF1 606 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 KIF28PB7ZC32 967 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 GYG2O15488 501 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 DNAJC8O75937 253 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 PSAPP07602 524 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 GCLMP48507 274 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 VSNL1P62760 191 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 THOC5Q13769 683 aaKnown RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 E4F1Q66K89 784 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 RNF207Q6ZRF8 634 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 SPATA4Q8NEY3 305 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 CXorf38Q8TB03 319 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.07□□□□□ -0.16
LCA5-202ENST00000392959 FIS1Q9Y3D6 152 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 USP17L5A8MUK1 530 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 COPEO14579 308 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 PMS2P54278 862 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 IL1RL1Q01638 556 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 CAV1Q03135 178 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 GRAPQ13588 217 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 GRAPLQ8TC17 118 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 SKA2Q8WVK7 121 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 FAM193BQ96PV7 902 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 MSTO1Q9BUK6 570 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 TRAIPQ9BWF2 469 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms