RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ATP2A1O14983 1001 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 ASIC1P78348 528 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 CDK17Q00537 523 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 CKAP4Q07065 602 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 COBLL1Q53SF7 1204 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 FIGNQ5HY92 759 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 OTOP1Q7RTM1 612 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 EIF3CQ99613 913 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 DUSP9Q99956 384 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 R3HDMLQ9H3Y0 253 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 KCNH7Q9NS40 1196 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 RGL1Q9NZL6 768 aa21.9■■□□□ 1.1
CSNK1D-203ENST00000392334 ANO9A1A5B4 782 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 BICDL2A1A5D9 508 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 MYMKA6NI61 221 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 TMEM88BA6NKF7 163 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 PDHXO00330 501 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 IPO5O00410 1097 aaKnown RBP21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 KRT86O43790 486 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 GAS7O60861 476 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 CCNE1P24864 410 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 AARSP49588 968 aaKnown RBP eCLIP21.89■■□□□ 1.15e-7■■■■■ 34.9
CSNK1D-203ENST00000392334 CCDC122Q5T0U0 273 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 PCNX4Q63HM2 1172 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 FAM114A1Q8IWE2 563 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 HPS3Q969F9 1004 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 IQCDQ96DY2 449 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 PDCD2LQ9BRP1 358 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 MAP3K20Q9NYL2 800 aaKnown RBP21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 CYP39A1Q9NYL5 469 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 STK17AQ9UEE5 414 aa21.89■■□□□ 1.1
CSNK1D-203ENST00000392334 A0A1W2PQJ5 194 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 PSMD10O75832 226 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 PSMC6P62333 389 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 ZBED6P86452 979 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 MAP9Q49MG5 647 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 SLC5A5Q92911 643 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 TUBGCP2Q9BSJ2 902 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 TXNRD2Q9NNW7 524 aa21.89■■□□□ 1.09
CSNK1D-203ENST00000392334 TESPA1A2RU30 521 aaPredicted RBP21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 ATP1A1P05023 1023 aaKnown RBP21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 SPATA31C1P0DKV0 1188 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 AMPD3Q01432 767 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 GRM1Q13255 1194 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 TKFCQ3LXA3 575 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 HSP90B2PQ58FF3 399 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 NCAPG2Q86XI2 1143 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 CCDC47Q96A33 483 aaKnown RBP21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 JAKMIP2Q96AA8 810 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 FAN1Q9Y2M0 1017 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 A0A0G2JMZ2 1700 aa21.88■■□□□ 1.09
CSNK1D-203ENST00000392334 N4BP1O75113 896 aaKnown RBP21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 CAPN2P17655 700 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 SETQ01105 290 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 HAUS3Q68CZ6 603 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 P2RX5Q93086 422 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 C7orf25Q9BPX7 421 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 EIF2AK1Q9BQI3 630 aaKnown RBP21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 NT5C3AQ9H0P0 336 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 ZNHIT6Q9NWK9 470 aaKnown RBP21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 RASSF10A6NK89 507 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 LRRIQ3A6PVS8 624 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 IVLP07476 585 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 OSBPP22059 807 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 PABPC4Q13310 644 aaKnown RBP eCLIP21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 MTMR1Q13613 665 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 CTTNQ14247 550 aaKnown RBP21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 ANKRD35Q8N283 1001 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 CSGALNACT2Q8N6G5 542 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 ERMNQ8TAM6 284 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 ERGIC2Q96RQ1 377 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 UNC45AQ9H3U1 944 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 RBPJLQ9UBG7 517 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 KDM3AQ9Y4C1 1321 aa21.87■■□□□ 1.09
CSNK1D-203ENST00000392334 B4DLN1 442 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 CNMDO75829 334 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 FCER1AP12319 257 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 PDE4DQ08499 809 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 HYIQ5T013 277 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 LEKR1Q6ZMV7 388 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 KIAA1328Q86T90 577 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 DDX12PQ92771 950 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 MMS19Q96T76 1030 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 SPATC1LQ9H0A9 340 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 RABGAP1Q9Y3P9 1069 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 UBIAD1Q9Y5Z9 338 aa21.86■■□□□ 1.09
CSNK1D-203ENST00000392334 NPHP3-ACAD11A0A0J9YXS1 232 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 FAM155AB1AL88 458 aaPredicted RBP21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 NR3C2P08235 984 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 PLA2G4BP0C869 781 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 IDEP14735 1019 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 RPA1P27694 616 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 CNTN2Q02246 1040 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 CACNB1Q02641 598 aaPredicted RBP21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 Q3C1V9 767 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 TPH2Q8IWU9 490 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 ZIC5Q96T25 663 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 JADE2Q9NQC1 790 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 TMEM51Q9NW97 253 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 SLC10A3P09131 477 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms