RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 YIPF4Q9BSR8 244 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 PLA2G12BQ9BX93 195 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 KIAA1683Q9H0B3 1180 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 ST7Q9NRC1 585 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 DSEQ9UL01 958 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 SRPK3Q9UPE1 567 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 MSRB2Q9Y3D2 182 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 TRAF6Q9Y4K3 522 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 TNFRSF18Q9Y5U5 241 aa2.99□□□□□ -1.93
SNORA40.19-201ENST00000390846 H0Y858 1186 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 ZNF561-AS1K7EIQ3 104 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 PRODHO43272 600 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 KCNA6P17658 529 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 CR2P20023 1033 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 ETV4P43268 484 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 SQSTM1Q13501 440 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 TKFCQ3LXA3 575 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 TNNI3KQ59H18 835 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 EEPD1Q7L9B9 569 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 FMNL3Q8IVF7 1028 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 NTN5Q8WTR8 489 aaPredicted RBP2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 SGSM3Q96HU1 749 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 WNK4Q96J92 1243 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 ZFYVE21Q9BQ24 234 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 CARD11Q9BXL7 1154 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 METTL14Q9HCE5 456 aaKnown RBP2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 JADE2Q9NQC1 790 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 SNTG2Q9NY99 539 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 LRP2BPQ9P2M1 347 aa2.98□□□□□ -1.93
SNORA40.19-201ENST00000390846 ESYT3A0FGR9 886 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 ARVCFO00192 962 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 KRIT1O00522 736 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 PDE6AP16499 860 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 PTPN1P18031 435 aaKnown RBP2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 PROZP22891 400 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 AOAHP28039 575 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 CDKN1CP49918 316 aaPredicted RBP2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 JAM2P57087 298 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 ANAPC15P60006 121 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 RBM10P98175 930 aaKnown RBP2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 PTH1RQ03431 593 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 KIZQ2M2Z5 673 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 NRN1LQ496H8 165 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 TMEM200BQ69YZ2 307 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 SPATC1Q76KD6 591 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 OSTM1Q86WC4 334 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 TSR2Q969E8 191 aaKnown RBP2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 CEP89Q96ST8 783 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 TRIM8Q9BZR9 551 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 CHST12Q9NRB3 414 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 GPRC5BQ9NZH0 403 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 C11orf21Q9P2W6 132 aa2.97□□□□□ -1.93
SNORA40.19-201ENST00000390846 KRTAP23-1A1A580 65 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 DNAJC6O75061 913 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 PPFIA4O75335 1185 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 ZNF202O95125 648 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 PDGFRBP09619 1106 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 ACRV1P26436 265 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 ZFP36P26651 326 aaKnown RBP2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 MASP1P48740 699 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 PTTG1IPP53801 180 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 GYS2P54840 703 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 TBX4P57082 545 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 RHBDL3P58872 404 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 ST5P78524 1137 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 LACTBP83111 547 aaPredicted RBP2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 PURAQ00577 322 aaKnown RBP2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 ACAP1Q15027 740 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 SMN1Q16637 294 aaKnown RBP2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 LSM12Q3MHD2 195 aaKnown RBP2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 MAP9Q49MG5 647 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 DALRD3Q5D0E6 543 aaKnown RBP2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 CCDC181Q5TID7 509 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 ANKS3Q6ZW76 656 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 POLNQ7Z5Q5 900 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 NOSTRINQ8IVI9 506 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 IFNL3Q8IZI9 196 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 MKL1Q969V6 931 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 MRFAP1L1Q96HT8 127 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 EXOC2Q96KP1 924 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 AARSD1Q9BTE6 412 aaKnown RBP2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 SPC25Q9HBM1 224 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 FANCLQ9NW38 375 aa2.96□□□□□ -1.94
SNORA40.19-201ENST00000390846 KCNK3O14649 394 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 ARHGAP6O43182 974 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 MAFKO60675 156 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 CUTAO60888 179 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 PYGMP11217 842 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 GNAT1P11488 350 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 RRADP55042 308 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 NANOS3P60323 173 aaKnown RBP2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 RAC3P60763 192 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 TGFB2P61812 414 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 CD83Q01151 205 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 GNL2Q13823 731 aaKnown RBP2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 RAB33AQ14088 237 aa2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 HSP90AA2PQ14568 343 aaPredicted RBP2.95□□□□□ -1.94
SNORA40.19-201ENST00000390846 PCOLCEQ15113 449 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms