RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 TCEANC2Q96MN5 208 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 NCAPGQ9BPX3 1015 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 MTA3Q9BTC8 594 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 GBA2Q9HCG7 927 aaPredicted RBP8.42□□□□□ -1.06
TRBV28-201ENST00000390400 PDRG1Q9NUG6 133 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 ZBTB21Q9ULJ3 1066 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 FZD1Q9UP38 647 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 SMC3Q9UQE7 1217 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 PASKQ96RG2 1323 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 MYH4Q9Y623 1939 aa8.42□□□□□ -1.06
TRBV28-201ENST00000390400 TNKSO95271 1327 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 IGKV6D-41A0A0C4DH26 115 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 EFCAB8A8MWE9 144 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 UBE2Q2LH0YL09 131 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 TLR3O15455 904 aaKnown RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 NMT2O60551 498 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 CAPN2P17655 700 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 GUCY1A2P33402 732 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 PCBP4P57723 403 aaKnown RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 EXOSC10Q01780 885 aaKnown RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 ICA1Q05084 483 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 PTPN11Q06124 597 aaPredicted RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 VGLL4Q14135 290 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 WTAPQ15007 396 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 SEPT2Q15019 361 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 SHROOM1Q2M3G4 852 aaPredicted RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 ICE2Q659A1 982 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 CCDC81Q6ZN84 652 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 MOB2Q70IA6 237 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 LRRC8AQ8IWT6 810 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 SUGP1Q8IWZ8 645 aaKnown RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 ANKRD13AQ8IZ07 590 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 VWA5B2Q8N398 1253 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 ENAHQ8N8S7 591 aaPredicted RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 FBXO18Q8NFZ0 1043 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 GRIN3AQ8TCU5 1115 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 ZKSCAN4Q969J2 545 aaPredicted RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 CEP95Q96GE4 821 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 TTC14Q96N46 770 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 MYCBPQ99417 103 aaPredicted RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 BPIFA3Q9BQP9 254 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 LRRC2Q9BYS8 371 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 NAT10Q9H0A0 1025 aaKnown RBP8.41□□□□□ -1.06
TRBV28-201ENST00000390400 CLSTN2Q9H4D0 955 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 KANSL2Q9H9L4 492 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 TCP11L1Q9NUJ3 509 aa8.41□□□□□ -1.06
TRBV28-201ENST00000390400 FAM221AA4D161 298 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 GOLGA6L19H0YKK7 550 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SH2B2O14492 632 aaPredicted RBP8.4□□□□□ -1.06
TRBV28-201ENST00000390400 TTLL1O95922 423 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 CPP00450 1065 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SSBP05455 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRBV28-201ENST00000390400 PTPRAP18433 802 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SYT1P21579 422 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 PTGS1P23219 599 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 USP8P40818 1118 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 JAG1P78504 1218 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SEC23AQ15436 765 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SNAP47Q5SQN1 464 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 PERM1Q5SV97 790 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 IFIT1BQ5T764 474 aaKnown RBP8.4□□□□□ -1.06
TRBV28-201ENST00000390400 CST9Q5W186 159 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 HGSNATQ68CP4 663 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 FBXO38Q6PIJ6 1188 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 NFXL1Q6ZNB6 911 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.4□□□□□ -1.06
TRBV28-201ENST00000390400 Q6ZUG5 572 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 ANKS3Q6ZW76 656 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 CCDC186Q7Z3E2 898 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 DGKHQ86XP1 1220 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 CLEC10AQ8IUN9 316 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 TMTC2Q8N394 836 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 FAM169BQ8N8A8 192 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 HNRNPLLQ8WVV9 542 aaKnown RBP8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SHDQ96IW2 340 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 C16orf45Q96MC5 204 aaPredicted RBP8.4□□□□□ -1.06
TRBV28-201ENST00000390400 CEP44Q9C0F1 390 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 LY9Q9HBG7 655 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 IL17RBQ9NRM6 502 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 MTMR4Q9NYA4 1195 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 NYAP2Q9P242 653 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 CLIP2Q9UDT6 1046 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 GPN3Q9UHW5 284 aaPredicted RBP8.4□□□□□ -1.06
TRBV28-201ENST00000390400 DNAI1Q9UI46 699 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 PPT2Q9UMR5 302 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 STX8Q9UNK0 236 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 SNCAIPQ9Y6H5 919 aa8.4□□□□□ -1.06
TRBV28-201ENST00000390400 CCDC69A6NI79 296 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 PPFIA3O75145 1194 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 PNMA6AP0CW24 399 aaPredicted RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 TOP1P11387 765 aaKnown RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 EEF2P13639 858 aaKnown RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 CPB1P15086 417 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 GUCY2CP25092 1073 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms