RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 MMRN2Q9H8L6 949 aa27.75■■■□□ 2.03
SHOX2-201ENST00000389589 NR3C1P04150 777 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 CDK17Q00537 523 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 TTLL12Q14166 644 aaPredicted RBP27.74■■■□□ 2.03
SHOX2-201ENST00000389589 WDR59Q6PJI9 974 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 SMAP1Q8IYB5 467 aaPredicted RBP27.74■■■□□ 2.03
SHOX2-201ENST00000389589 CHP1Q99653 195 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 BCAS3Q9H6U6 928 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 METTL14Q9HCE5 456 aaKnown RBP27.74■■■□□ 2.03
SHOX2-201ENST00000389589 ANKEF1Q9NU02 776 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 DNAI1Q9UI46 699 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 PCDHA10Q9Y5I2 948 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 MAPTP10636 758 aaKnown RBP27.74■■■□□ 2.03
SHOX2-201ENST00000389589 IRX3P78415 501 aaPredicted RBP27.74■■■□□ 2.03
SHOX2-201ENST00000389589 MAPK7Q13164 816 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 PPIL2Q13356 520 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 NEK11Q8NG66 645 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 ARMCX3Q9UH62 379 aaPredicted RBP27.74■■■□□ 2.03
SHOX2-201ENST00000389589 KCNH4Q9UQ05 1017 aa27.74■■■□□ 2.03
SHOX2-201ENST00000389589 EPN1Q9Y6I3 576 aaPredicted RBP27.74■■■□□ 2.03
SHOX2-201ENST00000389589 DKC1O60832 514 aaKnown RBP eCLIP27.73■■■□□ 2.03
SHOX2-201ENST00000389589 KCNA2P16389 499 aa27.73■■■□□ 2.03
SHOX2-201ENST00000389589 ANKRD35Q8N283 1001 aa27.73■■■□□ 2.03
SHOX2-201ENST00000389589 CLMNQ96JQ2 1002 aa27.73■■■□□ 2.03
SHOX2-201ENST00000389589 LARSQ9P2J5 1176 aaKnown RBP27.73■■■□□ 2.03
SHOX2-201ENST00000389589 DOCK5Q9H7D0 1870 aa27.73■■■□□ 2.03
SHOX2-201ENST00000389589 GLTPD2A6NH11 291 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 CTIFO43310 598 aaKnown RBP27.72■■■□□ 2.03
SHOX2-201ENST00000389589 RGS20O76081 388 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 HNRNPH3P31942 346 aaKnown RBP27.72■■■□□ 2.03
SHOX2-201ENST00000389589 ALCAMQ13740 583 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 FAM207AQ9NSI2 230 aaPredicted RBP27.72■■■□□ 2.03
SHOX2-201ENST00000389589 BTBD7Q9P203 1132 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 ZMYM2Q9UBW7 1377 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 NDUFA10O95299 355 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 ERCC3P19447 782 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 DAW1Q8N136 415 aa27.72■■■□□ 2.03
SHOX2-201ENST00000389589 SPATA31C2B4DYI2 1134 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 TGFB1I1O43294 461 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 EPB41P11171 864 aaKnown RBP27.71■■■□□ 2.03
SHOX2-201ENST00000389589 STXBP2Q15833 593 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 UGCGQ16739 394 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 ARMC9Q7Z3E5 817 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 CCDC170Q8IYT3 715 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 GOLGA5Q8TBA6 731 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 IQCA1LA6NCM1 817 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 GNG11P61952 73 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 KCNA1Q09470 495 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 ZC2HC1CQ53FD0 456 aaPredicted RBP27.71■■■□□ 2.03
SHOX2-201ENST00000389589 HS2ST1Q7LGA3 356 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 STRA6Q9BX79 667 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 SPATC1LQ9H0A9 340 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 L2HGDHQ9H9P8 463 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 PLAGL2Q9UPG8 496 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 AGTPBP1Q9UPW5 1226 aa27.71■■■□□ 2.03
SHOX2-201ENST00000389589 CYLC1P35663 651 aaPredicted RBP27.7■■■□□ 2.02
SHOX2-201ENST00000389589 KCNMA1Q12791 1236 aa27.7■■■□□ 2.02
SHOX2-201ENST00000389589 ACRBPQ8NEB7 543 aa27.7■■■□□ 2.02
SHOX2-201ENST00000389589 SMCR8Q8TEV9 937 aaPredicted RBP27.7■■■□□ 2.02
SHOX2-201ENST00000389589 ATP6V0A1Q93050 837 aa27.7■■■□□ 2.02
SHOX2-201ENST00000389589 DRC1Q96MC2 740 aa27.7■■■□□ 2.02
SHOX2-201ENST00000389589 JPH1Q9HDC5 661 aaPredicted RBP27.7■■■□□ 2.02
SHOX2-201ENST00000389589 MYH9P35579 1960 aaKnown RBP27.7■■■□□ 2.02
SHOX2-201ENST00000389589 EIF3JO75822 258 aaKnown RBP27.69■■■□□ 2.02
SHOX2-201ENST00000389589 PSAPP07602 524 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 KCNH2Q12809 1159 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 ARID2Q68CP9 1835 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 PPP1R37O75864 691 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 ICAM3P32942 547 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 ARHGAP29Q52LW3 1261 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 MOB2Q70IA6 237 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 OTUD6AQ7L8S5 288 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 GBP3Q9H0R5 595 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 NUCKS1Q9H1E3 243 aaKnown RBP27.69■■■□□ 2.02
SHOX2-201ENST00000389589 ASCC2Q9H1I8 757 aaPredicted RBP27.69■■■□□ 2.02
SHOX2-201ENST00000389589 TAF1DQ9H5J8 278 aaPredicted RBP27.69■■■□□ 2.02
SHOX2-201ENST00000389589 LZTFL1Q9NQ48 299 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 SLC9A2Q9UBY0 812 aa27.69■■■□□ 2.02
SHOX2-201ENST00000389589 USO1O60763 962 aaKnown RBP27.68■■■□□ 2.02
SHOX2-201ENST00000389589 AKAP3O75969 853 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 XRCC5P13010 732 aaKnown RBP27.68■■■□□ 2.02
SHOX2-201ENST00000389589 PLS3P13797 630 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 CASQ1P31415 396 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 HERVK_113P62684 666 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 FASTKD5Q7L8L6 764 aaKnown RBP27.68■■■□□ 2.02
SHOX2-201ENST00000389589 SLC17A8Q8NDX2 589 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 MKNK1Q9BUB5 465 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 CEP72Q9P209 647 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 EPHB6O15197 1021 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 KIF5CO60282 957 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 COPB2P35606 906 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 KRT83P78385 493 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 XKR9Q5GH70 373 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 CACNA2D4Q7Z3S7 1137 aa27.68■■■□□ 2.02
SHOX2-201ENST00000389589 K7ENM7 598 aa27.67■■■□□ 2.02
SHOX2-201ENST00000389589 BACH1O14867 736 aa27.67■■■□□ 2.02
SHOX2-201ENST00000389589 CLIC2O15247 247 aa27.67■■■□□ 2.02
SHOX2-201ENST00000389589 AFPP02771 609 aaKnown RBP27.67■■■□□ 2.02
SHOX2-201ENST00000389589 GPR162Q16538 588 aa27.67■■■□□ 2.02
SHOX2-201ENST00000389589 EAPPQ56P03 285 aaPredicted RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms