RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 ECE2O60344 883 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 LCA5LO95447 670 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 HSPA1LP34931 641 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 AOC3Q16853 763 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 ABCB11O95342 1321 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 MYO1FO00160 1098 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 CETN3O15182 167 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 MSH4O15457 936 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 SERPING1P05155 500 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 PPARDQ03181 441 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 RBBP5Q15291 538 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZKSCAN8Q15776 578 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 KRT27Q7Z3Y8 459 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 AJAP1Q9UKB5 411 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 DNM3Q9UQ16 869 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 TARSL2A2RTX5 802 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 AGPSO00116 658 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 OPLAHO14841 1288 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 GCNT3O95395 438 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 CFBP00751 764 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 USP11P51784 963 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 SYDE2Q5VT97 1194 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 HAUS3Q68CZ6 603 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 CCDC174Q6PII3 467 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 OTUD6BQ8N6M0 293 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 BCS1LQ9Y276 419 aa12.8□□□□□ -0.36
RAPGEF3-201ENST00000389212 CLRN2A0PK11 232 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 AKAP3O75969 853 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 TUBBP07437 444 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ALDH1B1P30837 517 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 TRADDQ15628 312 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ASIC2Q16515 512 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 KIAA1755Q5JYT7 1200 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 RPUSD2Q8IZ73 545 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 DCAF4Q8WV16 495 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 CEP63Q96MT8 703 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 NYAP2Q9P242 653 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 FAM169AQ9Y6X4 670 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 TCP10L2B9ZVM9 353 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 PAFAH1B1P43034 410 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 PTK2Q05397 1052 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 TRMT1LQ7Z2T5 733 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 TSEN2Q8NCE0 465 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 IQCDQ96DY2 449 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 CABS1Q96KC9 395 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 SPAG5Q96R06 1193 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 EHD4Q9H223 541 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 GANQ9H2C0 597 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ETAA1Q9NY74 926 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 UTRNP46939 3433 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 SSU72P8A0A1W2PR75 194 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 EME2A4GXA9 379 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 TCP1P17987 556 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZC2HC1CQ53FD0 456 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 IQCEQ6IPM2 695 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 CCDC70Q6NSX1 233 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 C8orf74Q6P047 294 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 TPH2Q8IWU9 490 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ACER1Q8TDN7 264 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 IFT81Q8WYA0 676 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ITFG2Q969R8 447 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 PRMT6Q96LA8 375 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 ARMCX3Q9UH62 379 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-201ENST00000389212 KLHL33A6NCF5 533 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 PJA2O43164 708 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 PPP1R12BO60237 982 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 BMP3P12645 472 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 NMT1P30419 496 aaKnown RBP12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 NLGN1Q8N2Q7 840 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 MMGT1Q8N4V1 131 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 MKL1Q969V6 931 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 GOLGA6BA6NDN3 693 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 GLI1P08151 1106 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 PLS1Q14651 629 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 COG2Q14746 738 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 KNOP1Q1ED39 458 aaKnown RBP12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 MFSD4BQ5TF39 518 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 TMEM179Q6ZVK1 233 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZNF571Q7Z3V5 609 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 PODNQ7Z5L7 613 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 AFAP1L1Q8TED9 768 aa12.78□□□□□ -0.36
RAPGEF3-201ENST00000389212 AENQ8WTP8 325 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms