RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 MKNK1Q9BUB5 465 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 WDR11Q9BZH6 1224 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 VCPKMTQ9H867 229 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 CXCR5P32302 372 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 ZNF131P52739 623 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 JAM2P57087 298 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 PTK2Q05397 1052 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 CEP55Q53EZ4 464 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 B3GNT9Q6UX72 402 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 TPH2Q8IWU9 490 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 NACC1Q96RE7 527 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 DMGDHQ9UI17 866 aaKnown RBP16.38■□□□□ 0.21
SCFD2-201ENST00000388940 FRMPD4Q14CM0 1322 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 CNTNAP1P78357 1384 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 CES2O00748 559 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 CASP4P49662 377 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 SETQ01105 290 aaPredicted RBP16.37■□□□□ 0.21
SCFD2-201ENST00000388940 ARID5AQ03989 594 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 DLGAP5Q15398 846 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
SCFD2-201ENST00000388940 ZNF571Q7Z3V5 609 aaPredicted RBP16.37■□□□□ 0.21
SCFD2-201ENST00000388940 PIGOQ8TEQ8 1089 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 PARVGQ9HBI0 331 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 STIM2Q9P246 746 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 NENFQ9UMX5 172 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 ZMYM2Q9UBW7 1377 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 GAS7O60861 476 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
SCFD2-201ENST00000388940 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 MYCT1Q8N699 235 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 HDAC7Q8WUI4 952 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 FIZ1Q96SL8 496 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 BCAS3Q9H6U6 928 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 FEM1BQ9UK73 627 aa16.37■□□□□ 0.21
SCFD2-201ENST00000388940 MYH11P35749 1972 aa16.36■□□□□ 0.21
SCFD2-201ENST00000388940 KCNA1Q09470 495 aa16.36■□□□□ 0.21
SCFD2-201ENST00000388940 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
SCFD2-201ENST00000388940 IFI16Q16666 785 aaKnown RBP16.36■□□□□ 0.21
SCFD2-201ENST00000388940 DCAF17Q5H9S7 520 aaPredicted RBP16.36■□□□□ 0.21
SCFD2-201ENST00000388940 STXBP4Q6ZWJ1 553 aa16.36■□□□□ 0.21
SCFD2-201ENST00000388940 RBM46Q8TBY0 533 aaKnown RBP16.36■□□□□ 0.21
SCFD2-201ENST00000388940 PSMB7Q99436 277 aa16.36■□□□□ 0.21
SCFD2-201ENST00000388940 PSMD1Q99460 953 aa16.36■□□□□ 0.21
SCFD2-201ENST00000388940 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 CLIC2O15247 247 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 C21orf2O43822 256 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 GFPT2O94808 682 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 POLD1P28340 1107 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 LMAN1P49257 510 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 PAXIP1Q6ZW49 1069 aaPredicted RBP16.35■□□□□ 0.21
SCFD2-201ENST00000388940 ZNF720Q7Z2F6 126 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 PACSIN1Q9BY11 444 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 RBM12Q9NTZ6 932 aaKnown RBP16.35■□□□□ 0.21
SCFD2-201ENST00000388940 DMAC2Q9NW81 257 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 NAGPAQ9UK23 515 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 SFI1A8K8P3 1242 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 PPP1R12BO60237 982 aaPredicted RBP16.35■□□□□ 0.21
SCFD2-201ENST00000388940 NMT1P30419 496 aaKnown RBP16.35■□□□□ 0.21
SCFD2-201ENST00000388940 EPHB4P54760 987 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 HNRNPH2P55795 449 aaKnown RBP16.35■□□□□ 0.21
SCFD2-201ENST00000388940 TCERG1LQ5VWI1 586 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 EMBQ6PCB8 327 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 FAM83AQ86UY5 434 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 FAM186BQ8IYM0 893 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 RTKN2Q8IZC4 609 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 MTMR14Q8NCE2 650 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 NEK9Q8TD19 979 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 RIT2Q99578 217 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 ZNF577Q9BSK1 485 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 TEKT3Q9BXF9 490 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 EHD2Q9NZN4 543 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 INTUQ9ULD6 942 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 DAAM1Q9Y4D1 1078 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
SCFD2-201ENST00000388940 VGLL3A8MV65 326 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 RNF40O75150 1001 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 FLOT1O75955 427 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 GUCY2CP25092 1073 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 CAP2P40123 477 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 MATR3P43243 847 aaKnown RBP eCLIP16.34■□□□□ 0.219e-7■■■■■ 27.1
SCFD2-201ENST00000388940 MAP3K10Q02779 954 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 LDHDQ86WU2 507 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 GSPT2Q8IYD1 628 aaKnown RBP16.34■□□□□ 0.21
SCFD2-201ENST00000388940 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 GOLGA5Q8TBA6 731 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 CAVIN3Q969G5 261 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 INPP4AQ96PE3 977 aaPredicted RBP16.34■□□□□ 0.21
SCFD2-201ENST00000388940 UNC45AQ9H3U1 944 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 SMARCAL1Q9NZC9 954 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 AGPSO00116 658 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 CHMP2AO43633 222 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 CLSTN1O94985 981 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 FTCDO95954 541 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms