RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 DDIASQ8IXT1 998 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 CDCA7Q9BWT1 371 aaPredicted RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 RPF1Q9H9Y2 349 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 ADCY2Q08462 1091 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 LRRC74AQ0VAA2 488 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 TTC23LQ6PF05 361 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 ZNF790Q6PG37 636 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 KCTD1Q719H9 257 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 ZFP42Q96MM3 310 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.4
RFX3-204ENST00000382004 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 MRPL40Q9NQ50 206 aaKnown RBP6.27□□□□□ -1.4
RFX3-204ENST00000382004 SENP1Q9P0U3 644 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 HEY1Q9Y5J3 304 aa6.27□□□□□ -1.4
RFX3-204ENST00000382004 BTBD18B2RXH4 712 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 LZTS3O60299 673 aaPredicted RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 PLD3Q8IV08 490 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 FANCBQ8NB91 859 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 FAM161BQ96MY7 647 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 MLXIPLQ9NP71 852 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 TRAF3IP3Q9Y228 551 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 ANKRD65E5RJM6 399 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 MYO1DO94832 1006 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 CYTH1Q15438 398 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 ELMSAN1Q6PJG2 1045 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 ANO5Q75V66 913 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 BZW1Q7L1Q6 419 aaKnown RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 EPM2AIP1Q7L775 607 aaPredicted RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 CHMP1BQ7LBR1 199 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 KCTD17Q8N5Z5 321 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 OR6B3Q8NGW1 331 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 NLRP4Q96MN2 994 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 ATP6V0A4Q9HBG4 840 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 NRBP1Q9UHY1 535 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 UBA6A0AVT1 1052 aaPredicted RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 ARHGEF37A1IGU5 675 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 KPNA7A9QM74 516 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 IPO5O00410 1097 aaKnown RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 MMEP08473 750 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 OSBPP22059 807 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 CCND2P30279 289 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SLC17A8Q8NDX2 589 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 AGR3Q8TD06 166 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SCG3Q8WXD2 468 aaKnown RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 SH3GL3Q99963 347 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 GAP43P17677 238 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 CMA1P23946 247 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SERPINB10P48595 397 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 MKRN3Q13064 507 aaKnown RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 CC2D2BQ6DHV5 1058 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 TRAF7Q6Q0C0 670 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 RASSF3Q86WH2 238 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 ELMOD1Q8N336 334 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 DSCC1Q9BVC3 393 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 AURKCQ9UQB9 309 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 GOLGA8IPA6NC78 632 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 GOLGA8JA6NMD2 632 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SUPT3HB4E1H0 165 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 RASA4BC9J798 803 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 RASA4O43374 803 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 GCKRQ14397 625 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 BEND6Q5SZJ8 279 aaPredicted RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 NLRP9Q7RTR0 991 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 ERICH1Q86X53 443 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SCN4BQ8IWT1 228 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 IFNL3Q8IZI9 196 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 INPP5DQ92835 1189 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SLC13A1Q9BZW2 595 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 TMEM245Q9H330 911 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SPTLC3Q9NUV7 552 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.27□□□□□ -1.41
RFX3-204ENST00000382004 PLAAQ9Y263 795 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 PCDHA5Q9Y5H7 936 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 PCDHA13Q9Y5I0 950 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SPDYE5A6NIY4 337 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SOWAHDA6NJG2 315 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 KRT37O76014 449 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 TJP3O95049 919 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 GYG1P46976 350 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SPDYE7PQ495Y7 208 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 SH3GL2Q99962 352 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 USE1Q9NZ43 259 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 PCDHGB4Q9UN71 923 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 TNKSO95271 1327 aa6.27□□□□□ -1.41
RFX3-204ENST00000382004 RWDD2BP57060 319 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 RASGRP4Q8TDF6 673 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 AFG1LQ8WV93 481 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 FAM81BQ96LP2 452 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 PYCARDQ9ULZ3 195 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 NFU1Q9UMS0 254 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 PCDHA7Q9UN72 937 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 CLRN2A0PK11 232 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 RASSF10A6NK89 507 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 KRT75O95678 551 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 EIF4A3P38919 411 aaKnown RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 BTDP43251 543 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ARHGEF6Q15052 776 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ANKS3Q6ZW76 656 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 NHEJ1Q9H9Q4 299 aaPredicted RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 C6orf203Q9P0P8 240 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms