RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 UBAP2Q5T6F2 1119 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 CNNM4Q6P4Q7 775 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 DMAP1Q9NPF5 467 aaPredicted RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 O00370 1275 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 FGFR1OPO95684 399 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 ASIC2Q16515 512 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 ARL6IP4Q66PJ3 421 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 TGS1Q96RS0 853 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 DDX50Q9BQ39 737 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 CCDC134Q9H6E4 229 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 INTUQ9ULD6 942 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 PCDHGA4Q9Y5G9 962 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 KDM3BQ7LBC6 1761 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 SPATA31A3Q5VYP0 1347 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 ADAMTS3O15072 1205 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 NUDT17P0C025 328 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 UBTFL6P0CB48 400 aaPredicted RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 CREB1P16220 341 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 EPHB2P29323 1055 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 EPS15P42566 896 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 CEP128Q6ZU80 1094 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 COL23A1Q86Y22 540 aaPredicted RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 MIPOL1Q8TD10 442 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 ARHGEF2Q92974 986 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 TNFRSF25Q93038 417 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 ZWILCHQ9H900 591 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 NR2E1Q9Y466 385 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 TECPR2O15040 1411 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 RBAK-RBAKDNI3L0D1 243 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 OAS1P00973 400 aaKnown RBP20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 ZCCHC18P0CG32 403 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 SEPT14Q6ZU15 432 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 DYMQ7RTS9 669 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 TRIM42Q8IWZ5 723 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 MIGA1Q8NAN2 632 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 CUEDC2Q9H467 287 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 GSTA2P09210 222 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 NPY5RQ15761 445 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 NAP1L3Q99457 506 aaPredicted RBP20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 TMEM60Q9H2L4 133 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 TCP11L1Q9NUJ3 509 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 STOML1Q9UBI4 398 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 LRCH1Q9Y2L9 728 aa20.54■□□□□ 0.88
SMARCD1-201ENST00000381513 CCDC194A0A1B0GVG4 234 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 TRAPPC10P48553 1259 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 MCL1Q07820 350 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 BARGINQ6ZT62 677 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 EPB41L4BQ9H329 900 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 CEP72Q9P209 647 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 FOXO6A8MYZ6 492 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 GJB6O95452 261 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 DEUP1Q05D60 604 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 LONRF1Q17RB8 773 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 CABP7Q86V35 215 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 KIAA0895Q8NCT3 520 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 RNF41Q9H4P4 317 aaPredicted RBP20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 CNNM1Q9NRU3 951 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 ATXN10Q9UBB4 475 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 RTL9Q8NET4 1388 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 ETS2P15036 469 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 VEGFAP15692 232 aaPredicted RBP20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 MTA1Q13330 715 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 LRRC41Q15345 812 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 LDHAL6AQ6ZMR3 332 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 MIGA2Q7L4E1 593 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 EXOC3L1Q86VI1 746 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 ECHDC2Q86YB7 292 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 AGGF1Q8N302 714 aaeCLIP20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 MYLK2Q9H1R3 596 aa20.53■□□□□ 0.88
SMARCD1-201ENST00000381513 GSG1L2A8MUP6 293 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 AFPP02771 609 aaKnown RBP20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 ATP8B4Q8TF62 1192 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 ESR2Q92731 530 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 ERP44Q9BS26 406 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 AMOTL2Q9Y2J4 779 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 NEO1Q92859 1461 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 BAG3O95817 575 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 CCNB1P14635 433 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 MAGEA10P43363 369 aaPredicted RBP20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 ZRSR2Q15696 482 aaKnown RBP20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 SNX30Q5VWJ9 437 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 MTRF1LQ9UGC7 380 aaKnown RBP20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 DIP2CQ9Y2E4 1556 aa20.52■□□□□ 0.88
SMARCD1-201ENST00000381513 GH1P01241 217 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 VHLP40337 213 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 PHKA1P46020 1223 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 AUHQ13825 339 aaKnown RBP20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 ALX1Q15699 326 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 LRRC15Q8TF66 581 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 TBC1D10AQ9BXI6 508 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 MYH1P12882 1939 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 CES2O00748 559 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 CYP27B1O15528 508 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 DESP17661 470 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 MGAT5Q09328 741 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 ZC2HC1CQ53FD0 456 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms