RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TSKSQ9UJT2 592 aa15.08■□□□□ 0
SDC1-202ENST00000381150 SUGT1Q9Y2Z0 365 aa15.08■□□□□ 0
SDC1-202ENST00000381150 C6orf89Q6UWU4 347 aa15.08■□□□□ 0
SDC1-202ENST00000381150 GJA10Q969M2 543 aa15.08■□□□□ 0
SDC1-202ENST00000381150 TSG101Q99816 390 aa15.08■□□□□ 0
SDC1-202ENST00000381150 PRMT1Q99873 361 aaKnown RBP15.08■□□□□ 0
SDC1-202ENST00000381150 ADAMTSL1Q8N6G6 1762 aa15.08■□□□□ 0
SDC1-202ENST00000381150 EME2A4GXA9 379 aaPredicted RBP15.07■□□□□ 0
SDC1-202ENST00000381150 RIMBP2O15034 1052 aa15.07■□□□□ 0
SDC1-202ENST00000381150 WLSQ5T9L3 541 aa15.07■□□□□ 0
SDC1-202ENST00000381150 PDXDC1Q6P996 788 aa15.07■□□□□ 0
SDC1-202ENST00000381150 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
SDC1-202ENST00000381150 PANK4Q9NVE7 773 aa15.07■□□□□ 0
SDC1-202ENST00000381150 ESYT2A0FGR8 921 aa15.07■□□□□ 0
SDC1-202ENST00000381150 ACTN1P12814 892 aa15.07■□□□□ 0
SDC1-202ENST00000381150 ABCB4P21439 1286 aa15.07■□□□□ 0
SDC1-202ENST00000381150 PLCB4Q15147 1175 aa15.07■□□□□ 0
SDC1-202ENST00000381150 ANKRD42Q8N9B4 389 aa15.07■□□□□ 0
SDC1-202ENST00000381150 INTS9Q9NV88 658 aaKnown RBP15.07■□□□□ 0
SDC1-202ENST00000381150 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
SDC1-202ENST00000381150 A8MUI8 341 aa15.07■□□□□ 0
SDC1-202ENST00000381150 AKR1B1P15121 316 aa15.07■□□□□ 0
SDC1-202ENST00000381150 KCNJ2P63252 427 aa15.07■□□□□ 0
SDC1-202ENST00000381150 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
SDC1-202ENST00000381150 LRRC34Q8IZ02 419 aa15.07■□□□□ 0
SDC1-202ENST00000381150 MMTAG2Q9BU76 263 aaKnown RBP15.07■□□□□ 0
SDC1-202ENST00000381150 MXD3Q9BW11 206 aa15.07■□□□□ 0
SDC1-202ENST00000381150 C6orf50Q9HD87 102 aa15.07■□□□□ 0
SDC1-202ENST00000381150 BIN2Q9UBW5 565 aaPredicted RBP15.07■□□□□ 0
SDC1-202ENST00000381150 UTP11Q9Y3A2 253 aaKnown RBP15.07■□□□□ 0
SDC1-202ENST00000381150 SPDYE3A6NKU9 549 aa15.06■□□□□ 0
SDC1-202ENST00000381150 CCT8L1PA6NM43 557 aa15.06■□□□□ 0
SDC1-202ENST00000381150 MYL1P05976 194 aa15.06■□□□□ 0
SDC1-202ENST00000381150 GNA11P29992 359 aa15.06■□□□□ 0
SDC1-202ENST00000381150 ITIH3Q06033 890 aa15.06■□□□□ 0
SDC1-202ENST00000381150 ARMC2Q8NEN0 867 aa15.06■□□□□ 0
SDC1-202ENST00000381150 LMBR1Q8WVP7 490 aa15.06■□□□□ 0
SDC1-202ENST00000381150 PLCB1Q9NQ66 1216 aa15.06■□□□□ 0
SDC1-202ENST00000381150 SPATS2LQ9NUQ6 558 aaKnown RBP15.06■□□□□ 0
SDC1-202ENST00000381150 SIK3Q9Y2K2 1263 aa15.06■□□□□ 0
SDC1-202ENST00000381150 NOC2LQ9Y3T9 749 aaKnown RBP15.06■□□□□ 0
SDC1-202ENST00000381150 GRID2IPA4D2P6 1211 aa15.06■□□□□ 0
SDC1-202ENST00000381150 RAD21O60216 631 aa15.06■□□□□ 0
SDC1-202ENST00000381150 KRT18P05783 430 aaKnown RBP15.06■□□□□ 0
SDC1-202ENST00000381150 HSPA9P38646 679 aaKnown RBP15.06■□□□□ 0
SDC1-202ENST00000381150 ZNF211Q13398 564 aaPredicted RBP15.06■□□□□ 0
SDC1-202ENST00000381150 ASIC2Q16515 512 aa15.06■□□□□ 0
SDC1-202ENST00000381150 DCAF17Q5H9S7 520 aaPredicted RBP15.06■□□□□ 0
SDC1-202ENST00000381150 CAPRIN2Q6IMN6 1127 aaKnown RBP15.06■□□□□ 0
SDC1-202ENST00000381150 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
SDC1-202ENST00000381150 RNF217Q8TC41 542 aa15.06■□□□□ 0
SDC1-202ENST00000381150 AGAP11Q8TF27 550 aa15.06■□□□□ 0
SDC1-202ENST00000381150 AK8Q96MA6 479 aa15.06■□□□□ 0
SDC1-202ENST00000381150 XPO6Q96QU8 1125 aaKnown RBP15.06■□□□□ 0
SDC1-202ENST00000381150 ISCUQ9H1K1 167 aa15.06■□□□□ 0
SDC1-202ENST00000381150 ATP6V0A4Q9HBG4 840 aa15.06■□□□□ 0
SDC1-202ENST00000381150 KCNK9Q9NPC2 374 aa15.06■□□□□ 0
SDC1-202ENST00000381150 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.06■□□□□ 0
SDC1-202ENST00000381150 POTEMA6NI47 508 aa15.05■□□□□ 0
SDC1-202ENST00000381150 RGS16O15492 202 aaPredicted RBP15.05■□□□□ 0
SDC1-202ENST00000381150 SHBGP04278 402 aa15.05■□□□□ 0
SDC1-202ENST00000381150 OR52Z1P0C646 297 aa15.05■□□□□ 0
SDC1-202ENST00000381150 DRP2Q13474 957 aa15.05■□□□□ 0
SDC1-202ENST00000381150 GNPTABQ3T906 1256 aa15.05■□□□□ 0
SDC1-202ENST00000381150 KRT27Q7Z3Y8 459 aa15.05■□□□□ 0
SDC1-202ENST00000381150 NEK8Q86SG6 692 aa15.05■□□□□ 0
SDC1-202ENST00000381150 TATDN2Q93075 761 aa15.05■□□□□ 0
SDC1-202ENST00000381150 AZI2Q9H6S1 392 aa15.05■□□□□ 0
SDC1-202ENST00000381150 ABCF3Q9NUQ8 709 aa15.05■□□□□ 0
SDC1-202ENST00000381150 SWAP70Q9UH65 585 aa15.05■□□□□ 0
SDC1-202ENST00000381150 SLC12A6Q9UHW9 1150 aa15.05■□□□□ 0
SDC1-202ENST00000381150 SNX24Q9Y343 169 aa15.05■□□□□ 0
SDC1-202ENST00000381150 SEMA3FQ13275 785 aa15.05■□□□□ -0
SDC1-202ENST00000381150 ZNF662Q6ZS27 426 aa15.05■□□□□ -0
SDC1-202ENST00000381150 TBCKQ8TEA7 893 aa15.05■□□□□ -0
SDC1-202ENST00000381150 PARD3BQ8TEW8 1205 aa15.05■□□□□ -0
SDC1-202ENST00000381150 KLHL29Q96CT2 875 aa15.05■□□□□ -0
SDC1-202ENST00000381150 MTMR9Q96QG7 549 aa15.05■□□□□ -0
SDC1-202ENST00000381150 FGFR1OPO95684 399 aaKnown RBP15.05■□□□□ -0
SDC1-202ENST00000381150 PICALMQ13492 652 aa15.05■□□□□ -0
SDC1-202ENST00000381150 CLEC10AQ8IUN9 316 aa15.05■□□□□ -0
SDC1-202ENST00000381150 PAIP2Q9BPZ3 127 aaKnown RBP15.05■□□□□ -0
SDC1-202ENST00000381150 TMEM260Q9NX78 707 aa15.05■□□□□ -0
SDC1-202ENST00000381150 COL11A2P13942 1736 aaPredicted RBP15.05■□□□□ -0
SDC1-202ENST00000381150 C10orf71Q711Q0 1435 aa15.04■□□□□ -0
SDC1-202ENST00000381150 A0A1W2PQJ5 194 aa15.04■□□□□ -0
SDC1-202ENST00000381150 MYMKA6NI61 221 aa15.04■□□□□ -0
SDC1-202ENST00000381150 TMEM110-MUSTN1A8MSY1 372 aa15.04■□□□□ -0
SDC1-202ENST00000381150 F8W031 263 aaPredicted RBP15.04■□□□□ -0
SDC1-202ENST00000381150 PGRMC1O00264 195 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 AP1G2O75843 785 aa15.04■□□□□ -0
SDC1-202ENST00000381150 FGGP02679 453 aa15.04■□□□□ -0
SDC1-202ENST00000381150 SHMT1P34896 483 aa15.04■□□□□ -0
SDC1-202ENST00000381150 BIRC3Q13489 604 aa15.04■□□□□ -0
SDC1-202ENST00000381150 AP1ARQ63HQ0 302 aa15.04■□□□□ -0
SDC1-202ENST00000381150 RNF10Q8N5U6 811 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 BAP1Q92560 729 aa15.04■□□□□ -0
SDC1-202ENST00000381150 GLG1Q92896 1179 aa15.04■□□□□ -0
SDC1-202ENST00000381150 RNF14Q9UBS8 474 aa15.04■□□□□ -0
SDC1-202ENST00000381150 FRMPD2Q68DX3 1309 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms