RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 CDC25AP30304 524 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 CCL23P55773 120 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 CEBPZQ03701 1054 aaKnown RBP22.35■■□□□ 1.17
CDPF1-202ENST00000381037 GPNMBQ14956 572 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 CCDC155Q8N6L0 562 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 ZNF579Q8NAF0 562 aaKnown RBP22.35■■□□□ 1.17
CDPF1-202ENST00000381037 LINC00301Q8NCQ3 95 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 ERMNQ8TAM6 284 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 SH2D3AQ9BRG2 576 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 TFIP11Q9UBB9 837 aaKnown RBP22.35■■□□□ 1.17
CDPF1-202ENST00000381037 CAND2O75155 1236 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 XRCC6P12956 609 aaKnown RBP eCLIP22.35■■□□□ 1.17
CDPF1-202ENST00000381037 SELPP16109 830 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 MUTP22033 750 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 ANP32AP39687 249 aaKnown RBP22.35■■□□□ 1.17
CDPF1-202ENST00000381037 ZNF618Q5T7W0 954 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 PLA2G4FQ68DD2 849 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 ZNF396Q96N95 335 aaPredicted RBP22.35■■□□□ 1.17
CDPF1-202ENST00000381037 CYP26B1Q9NR63 512 aa22.35■■□□□ 1.17
CDPF1-202ENST00000381037 FBXO2Q9UK22 296 aaPredicted RBP22.35■■□□□ 1.17
CDPF1-202ENST00000381037 IGKV6-21A0A0C4DH24 114 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 MAGEB2O15479 319 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 CSF2RAP15509 400 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 THPOP40225 353 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 NPEPPSP55786 919 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 HAUS3Q68CZ6 603 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 KIAA0319LQ8IZA0 1049 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 DNAJB3Q8WWF6 145 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 SCLYQ96I15 445 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 AK8Q96MA6 479 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 LBHD1Q9BQE6 289 aaPredicted RBP22.34■■□□□ 1.17
CDPF1-202ENST00000381037 ANKEF1Q9NU02 776 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 SRPRBQ9Y5M8 271 aaKnown RBP22.34■■□□□ 1.17
CDPF1-202ENST00000381037 STK24Q9Y6E0 443 aa22.34■■□□□ 1.17
CDPF1-202ENST00000381037 MARCKSP29966 332 aaPredicted RBP22.33■■□□□ 1.17
CDPF1-202ENST00000381037 EPHB4P54760 987 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 MBTPS1Q14703 1052 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 MTERF2Q49AM1 385 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 FAM26DQ5JW98 314 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 ATL3Q6DD88 541 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 POTEGQ6S5H5 508 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 LRRC8DQ7L1W4 858 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 C16orf59Q7L2K0 433 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 OTUD6AQ7L8S5 288 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 TMEM199Q8N511 208 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 RETREG2Q8NC44 543 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 DAXXQ9UER7 740 aaPredicted RBP22.33■■□□□ 1.17
CDPF1-202ENST00000381037 PPME1Q9Y570 386 aa22.33■■□□□ 1.17
CDPF1-202ENST00000381037 MYH15Q9Y2K3 1946 aa22.33■■□□□ 1.16
CDPF1-202ENST00000381037 A0A087WWV3 80 aa22.32■■□□□ 1.16
CDPF1-202ENST00000381037 MAFO75444 373 aaPredicted RBP22.32■■□□□ 1.16
CDPF1-202ENST00000381037 BMP8BP34820 402 aa22.32■■□□□ 1.16
CDPF1-202ENST00000381037 LONP1P36776 959 aaKnown RBP22.32■■□□□ 1.16
CDPF1-202ENST00000381037 CCT6AP40227 531 aaKnown RBP22.32■■□□□ 1.16
CDPF1-202ENST00000381037 FPGSQ05932 587 aa22.32■■□□□ 1.16
CDPF1-202ENST00000381037 FOXD4L6Q3SYB3 417 aaPredicted RBP22.32■■□□□ 1.16
CDPF1-202ENST00000381037 FOXD4L3Q6VB84 417 aaPredicted RBP22.32■■□□□ 1.16
CDPF1-202ENST00000381037 SNX29Q8TEQ0 813 aa22.32■■□□□ 1.16
CDPF1-202ENST00000381037 PIGOQ8TEQ8 1089 aa22.32■■□□□ 1.16
CDPF1-202ENST00000381037 TSHZ2Q9NRE2 1034 aa22.32■■□□□ 1.16
CDPF1-202ENST00000381037 LAMA3Q16787 3333 aa22.32■■□□□ 1.16
CDPF1-202ENST00000381037 RPLP2P05387 115 aaKnown RBP22.31■■□□□ 1.16
CDPF1-202ENST00000381037 DNM1Q05193 864 aaKnown RBP22.31■■□□□ 1.16
CDPF1-202ENST00000381037 MGAT3Q09327 533 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 TBC1D8BQ0IIM8 1120 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 MKRN4PQ13434 485 aaPredicted RBP22.31■■□□□ 1.16
CDPF1-202ENST00000381037 HYIQ5T013 277 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 KRT79Q5XKE5 535 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 NME8Q8N427 588 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 CEP170P1Q96L14 293 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 NACC1Q96RE7 527 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 FAM49AQ9H0Q0 323 aaPredicted RBP22.31■■□□□ 1.16
CDPF1-202ENST00000381037 DHX33Q9H6R0 707 aaKnown RBP22.31■■□□□ 1.16
CDPF1-202ENST00000381037 RSPH10B2B2RC85 870 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 YEATS4O95619 227 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 CHRNA1P02708 482 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 RSPH10BP0C881 870 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 RARRES1P49788 294 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 EFCAB12Q6NXP0 572 aa22.31■■□□□ 1.16
CDPF1-202ENST00000381037 DBR1Q9UK59 544 aaKnown RBP22.31■■□□□ 1.16
CDPF1-202ENST00000381037 RBM19Q9Y4C8 960 aaKnown RBP22.31■■□□□ 1.16
CDPF1-202ENST00000381037 RBAK-RBAKDNI3L0D1 243 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 PPP6R2O75170 966 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 RFC2P35250 354 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 NUCB2P80303 420 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 XKR9Q5GH70 373 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 LRRC71Q8N4P6 559 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 CHAMP1Q96JM3 812 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 CLIC6Q96NY7 704 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 PNMA5Q96PV4 448 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 OSBPL7Q9BZF2 842 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 CSRNP2Q9H175 543 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 KIAA1024Q9UPX6 916 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 LAMA2P24043 3122 aaKnown RBP22.3■■□□□ 1.16
CDPF1-202ENST00000381037 TANC1Q9C0D5 1861 aa22.3■■□□□ 1.16
CDPF1-202ENST00000381037 SPTLC2O15270 562 aa22.29■■□□□ 1.16
CDPF1-202ENST00000381037 NBNO60934 754 aa22.29■■□□□ 1.16
CDPF1-202ENST00000381037 PARNO95453 639 aaKnown RBP22.29■■□□□ 1.16
CDPF1-202ENST00000381037 CXCL10P02778 98 aa22.29■■□□□ 1.16
CDPF1-202ENST00000381037 CTSHP09668 335 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms