RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 SLC35C1Q96A29 364 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 SIX2Q9NPC8 291 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 PACSIN2Q9UNF0 486 aaPredicted RBP13.04□□□□□ -0.32
TRIM23-203ENST00000381018 A0A1W2PRG0 241 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 PPP1R12BO60237 982 aaPredicted RBP13.04□□□□□ -0.32
TRIM23-203ENST00000381018 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
TRIM23-203ENST00000381018 CLSTN1O94985 981 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 GLI1P08151 1106 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 JAM2P57087 298 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 TNNC1P63316 161 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 CTTNQ14247 550 aaKnown RBP13.04□□□□□ -0.32
TRIM23-203ENST00000381018 RPS6KA1Q15418 735 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 CC2D2BQ6DHV5 1058 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 ALKBH5Q6P6C2 394 aaKnown RBP13.04□□□□□ -0.32
TRIM23-203ENST00000381018 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 USP38Q8NB14 1042 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 TSEN2Q8NCE0 465 aaKnown RBP13.04□□□□□ -0.32
TRIM23-203ENST00000381018 KRT12Q99456 494 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 HSD17B14Q9BPX1 270 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 ARHGEF10LQ9HCE6 1279 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 NAGPAQ9UK23 515 aa13.04□□□□□ -0.32
TRIM23-203ENST00000381018 ZMYM2Q9UBW7 1377 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 H0YIN7 160 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 CLIC2O15247 247 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 GUCY2DQ02846 1103 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 NFIL3Q16649 462 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 TPH2Q8IWU9 490 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 MYCT1Q8N699 235 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 PIGOQ8TEQ8 1089 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 PBKQ96KB5 322 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 TRERF1Q96PN7 1200 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 WDR18Q9BV38 432 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIM23-203ENST00000381018 EPB41L5Q9HCM4 733 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 HERC5Q9UII4 1024 aaKnown RBP13.03□□□□□ -0.32
TRIM23-203ENST00000381018 PCDHB13Q9Y5F0 798 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 UBE4BO95155 1302 aa13.03□□□□□ -0.32
TRIM23-203ENST00000381018 KCNK3O14649 394 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 TGFB1I1O43294 461 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 PSMD10O75832 226 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 KIF4AO95239 1232 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 CFBP00751 764 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 FERP16591 822 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 PSMC2P35998 433 aaKnown RBP13.02□□□□□ -0.32
TRIM23-203ENST00000381018 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.32
TRIM23-203ENST00000381018 CARSP49589 748 aaKnown RBP13.02□□□□□ -0.32
TRIM23-203ENST00000381018 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.32
TRIM23-203ENST00000381018 KCNA1Q09470 495 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.32
TRIM23-203ENST00000381018 AOC3Q16853 763 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 SRLQ86TD4 932 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 FAM186BQ8IYM0 893 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 SLC5A5Q92911 643 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 BORCS6Q96GS4 357 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 DYDC2Q96IM9 177 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 PARVGQ9HBI0 331 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 POLD4Q9HCU8 107 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 GOPCQ9HD26 462 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.32
TRIM23-203ENST00000381018 SEL1LQ9UBV2 794 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 INTUQ9ULD6 942 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 NFU1Q9UMS0 254 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 NENFQ9UMX5 172 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.32
TRIM23-203ENST00000381018 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
TRIM23-203ENST00000381018 SHTN1A0MZ66 631 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 GCOM1H8Y6P7 765 aaPredicted RBP13.02□□□□□ -0.33
TRIM23-203ENST00000381018 CHMP2AO43633 222 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 PPFIA4O75335 1185 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 SLITRK3O94933 977 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 POLR2MP0CAP2 368 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 MUTP22033 750 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
TRIM23-203ENST00000381018 PRELPP51888 382 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 FOXR1Q6PIV2 292 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
TRIM23-203ENST00000381018 STXBP4Q6ZWJ1 553 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 WHAMMQ8TF30 809 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 LMBR1Q8WVP7 490 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 IFT81Q8WYA0 676 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.33
TRIM23-203ENST00000381018 MKNK1Q9BUB5 465 aa13.02□□□□□ -0.33
TRIM23-203ENST00000381018 AJAP1Q9UKB5 411 aaPredicted RBP13.02□□□□□ -0.33
TRIM23-203ENST00000381018 RRP15Q9Y3B9 282 aaKnown RBP13.02□□□□□ -0.33
TRIM23-203ENST00000381018 ZSCAN5CA6NGD5 496 aaPredicted RBP13.01□□□□□ -0.33
TRIM23-203ENST00000381018 GAS7O60861 476 aa13.01□□□□□ -0.33
TRIM23-203ENST00000381018 GFPT2O94808 682 aa13.01□□□□□ -0.33
TRIM23-203ENST00000381018 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
TRIM23-203ENST00000381018 STAT1P42224 750 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms